+ cd /Users/pd/r-devel + umask 022 + cd R + svn up --accept theirs-full Updating '.': U src/include/R_ext/Error.h U src/library/base/R/funprog.R U src/library/utils/R/write.table.R U src/main/coerce.c Updated to revision 87412. + tools/rsync-recommended receiving file list ... done sent 126 bytes received 741 bytes 1734.00 bytes/sec total size is 14188312 speedup is 16364.84 Creating links + curl -f http://journal.r-project.org/archive/RJournal.bib % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 251k 100 251k 0 0 1481k 0 --:--:-- --:--:-- --:--:-- 1488k + mv ttt share/texmf/bibtex/bib/RJournal.bib + cd .. + rm -rf BUILD-dist + mkdir BUILD-dist + cd R + aclocal -I m4 + autoconf + cd ../BUILD-dist + cp ../config.site . + ../R/configure --enable-maintainer-mode checking build system type... x86_64-apple-darwin21.6.0 checking host system type... x86_64-apple-darwin21.6.0 loading site script 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src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands configure: WARNING: --with-libdeflate-compression requires libdeflate R is now configured for x86_64-apple-darwin21.6.0 Source directory: ../R Installation directory: /usr/local C compiler: gcc -g -O2 Fortran fixed-form compiler: gfortran -g -O2 Default C++ compiler: g++ -std=gnu++17 -g -O2 C++11 compiler: g++ -std=gnu++11 -g -O2 C++14 compiler: g++ -std=gnu++14 -g -O2 C++17 compiler: g++ -std=gnu++17 -g -O2 C++20 compiler: g++ -std=gnu++20 -g -O2 C++23 compiler: g++ -std=gnu++2b -g -O2 Fortran free-form compiler: gfortran -g -O2 Obj-C compiler: gcc -g -O2 -fobjc-exceptions Interfaces supported: X11, aqua, tcltk External libraries: pcre2, readline, curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared BLAS, R profiling, maintainer mode Capabilities skipped: Options not enabled: memory profiling Recommended packages: yes + rm ../R/src/main/gram.c + rm ../R/src/library/tools/src/gramRd.c ../R/src/library/tools/src/gramLatex.c + make -j4 running CONFIG_SHELL=/bin/sh /bin/sh ../R/configure --enable-maintainer-mode --no-create --no-recursion checking build system type... x86_64-apple-darwin21.6.0 checking host 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(cached) yes checking whether the inttypes.h PRIxNN macros are broken... no checking for ld used by gcc... /Library/Developer/CommandLineTools/usr/bin/ld checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no checking for shared library run path origin... done checking whether imported symbols can be declared weak... no checking for multithread API to use... none checking for argz.h... no checking for inttypes.h... (cached) yes checking for limits.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... (cached) yes checking for getcwd... yes checking for getegid... yes checking for geteuid... yes checking for getgid... yes checking for getuid... yes checking for mempcpy... (cached) no checking for munmap... yes checking for stpcpy... (cached) yes checking for strcasecmp... yes checking for strdup... (cached) yes checking for strtoul... yes checking for tsearch... yes checking for argz_count... no checking for argz_stringify... no checking for argz_next... no checking for __fsetlocking... no checking whether feof_unlocked is declared... yes checking whether fgets_unlocked is declared... no checking for iconv... (cached) yes checking for iconv declaration... (cached) extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for NL_LOCALE_NAME macro... no checking for bison... bison checking version of bison... 3.8.2, ok checking for long long int... yes checking for long double... yes checking for wchar_t... yes checking for wint_t... yes checking for intmax_t... yes checking whether printf() supports POSIX/XSI format strings... yes checking whether we are using the GNU C Library 2.1 or newer... no checking for stdint.h... (cached) yes checking for SIZE_MAX... yes checking for stdint.h... (cached) yes checking for CFPreferencesCopyAppValue... yes checking for CFLocaleCopyCurrent... yes checking for ptrdiff_t... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for asprintf... yes checking for fwprintf... yes checking for putenv... (cached) yes checking for setenv... yes checking for setlocale... yes checking for snprintf... yes checking for wcslen... yes checking whether _snprintf is declared... no checking whether _snwprintf is declared... no checking whether getc_unlocked is declared... yes checking for nl_langinfo and CODESET... (cached) yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... (cached) yes checking for CFLocaleCopyCurrent... (cached) yes checking whether included gettext is requested... no checking for GNU gettext in libc... no checking for GNU gettext in libintl... no checking whether to use NLS... yes checking where the gettext function comes from... included intl directory Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... no using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status configure: WARNING: --with-libdeflate-compression requires libdeflate R is now configured for x86_64-apple-darwin21.6.0 Source directory: ../R Installation directory: /usr/local C compiler: gcc -g -O2 Fortran fixed-form compiler: gfortran -g -O2 Default C++ compiler: g++ -std=gnu++17 -g -O2 C++11 compiler: g++ -std=gnu++11 -g -O2 C++14 compiler: g++ -std=gnu++14 -g -O2 C++17 compiler: g++ -std=gnu++17 -g -O2 C++20 compiler: g++ -std=gnu++20 -g -O2 C++23 compiler: g++ -std=gnu++2b -g -O2 Fortran free-form compiler: gfortran -g -O2 Obj-C compiler: gcc -g -O2 -fobjc-exceptions Interfaces supported: X11, aqua, tcltk External libraries: pcre2, readline, curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared BLAS, R profiling, maintainer mode Capabilities skipped: Options not enabled: memory profiling Recommended packages: yes config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/manual/Makefile creating RESOURCES creating FAQ creating doc/html/resources.html config.status: creating m4/Makefile make[1]: Nothing to be done for `R'. config.status: creating tools/Makefile make[1]: Nothing to be done for `R'. config.status: creating doc/Makefile config.status: creating doc/html/Makefile make[2]: Nothing to be done for `R'. config.status: creating etc/Makefile config.status: creating etc/ldpaths config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating share/Makefile mkdir ../share/R mkdir ../share/dictionaries mkdir ../share/encodings mkdir ../share/java mkdir ../share/licenses mkdir ../share/make mkdir ../share/Rd mkdir ../share/Rd/macros mkdir ../share/sh mkdir ../share/texmf mkdir ../share/texmf/bibtex mkdir ../share/texmf/bibtex/bib mkdir ../share/texmf/bibtex/bst mkdir ../share/texmf/tex mkdir ../share/texmf/tex/latex config.status: creating src/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/scripts/R.sh creating src/scripts/R.fe mkdir ../../bin config.status: creating src/include/Makefile mkdir ../../include config.status: creating src/include/Rmath.h0 config.status: creating src/include/config.h config.status: src/include/config.h is unchanged config.status: creating src/include/R_ext/Makefile mkdir ../../../include/R_ext config.status: creating src/extra/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/tre/Makefile gfortran -fPIC -g -O2 -c ../../../../R/src/extra/blas/blas.f -o blas.o making regcomp.d from ../../../../R/src/extra/tre/regcomp.c config.status: creating src/extra/xdr/Makefile making xdr.d from ../../../../R/src/extra/xdr/xdr.c making regerror.d from ../../../../R/src/extra/tre/regerror.c making bindtextdom.d from ../../../../R/src/extra/intl/bindtextdom.c making xdr_float.d from ../../../../R/src/extra/xdr/xdr_float.c making regexec.d from ../../../../R/src/extra/tre/regexec.c making xdr_mem.d from ../../../../R/src/extra/xdr/xdr_mem.c making dcgettext.d from ../../../../R/src/extra/intl/dcgettext.c making tre-ast.d from ../../../../R/src/extra/tre/tre-ast.c making xdr_stdio.d from ../../../../R/src/extra/xdr/xdr_stdio.c making dgettext.d from ../../../../R/src/extra/intl/dgettext.c making gettext.d from ../../../../R/src/extra/intl/gettext.c gcc -I../../../../R/src/extra/xdr -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/xdr/xdr.c -o xdr.o making tre-compile.d from ../../../../R/src/extra/tre/tre-compile.c making finddomain.d from ../../../../R/src/extra/intl/finddomain.c gcc -I../../../../R/src/extra/xdr -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/xdr/xdr_float.c -o xdr_float.o making tre-match-approx.d from ../../../../R/src/extra/tre/tre-match-approx.c making loadmsgcat.d from ../../../../R/src/extra/intl/loadmsgcat.c gcc -I../../../../R/src/extra/xdr -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/xdr/xdr_mem.c -o xdr_mem.o making tre-match-backtrack.d from ../../../../R/src/extra/tre/tre-match-backtrack.c making textdomain.d from ../../../../R/src/extra/intl/textdomain.c gcc -I../../../../R/src/extra/xdr -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/xdr/xdr_stdio.c -o xdr_stdio.o making tre-match-parallel.d from ../../../../R/src/extra/tre/tre-match-parallel.c making l10nflist.d from ../../../../R/src/extra/intl/l10nflist.c making tre-mem.d from ../../../../R/src/extra/tre/tre-mem.c ar -cr libxdr.a xdr.o xdr_float.o xdr_mem.o xdr_stdio.o making explodename.d from ../../../../R/src/extra/intl/explodename.c ranlib libxdr.a making tre-parse.d from ../../../../R/src/extra/tre/tre-parse.c making dcigettext.d from ../../../../R/src/extra/intl/dcigettext.c gfortran -fPIC -g -O2 -c ../../../../R/src/extra/blas/blas2.f90 -o blas2.o making tre-stack.d from ../../../../R/src/extra/tre/tre-stack.c making dcngettext.d from ../../../../R/src/extra/intl/dcngettext.c making dngettext.d from ../../../../R/src/extra/intl/dngettext.c gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/regcomp.c -o regcomp.o making ngettext.d from ../../../../R/src/extra/intl/ngettext.c gfortran -fPIC -g -O2 -c ../../../../R/src/extra/blas/cmplxblas.f -o cmplxblas.o gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/regerror.c -o regerror.o making plural.d from ../../../../R/src/extra/intl/plural.c gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/regexec.c -o regexec.o making plural-exp.d from ../../../../R/src/extra/intl/plural-exp.c making langprefs.d from ../../../../R/src/extra/intl/langprefs.c gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/tre-ast.c -o tre-ast.o making localcharset.d from ../../../../R/src/extra/intl/localcharset.c making localename.d from ../../../../R/src/extra/intl/localename.c gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/tre-compile.c -o tre-compile.o making printf.d from ../../../../R/src/extra/intl/printf.c making osdep.d from ../../../../R/src/extra/intl/osdep.c making intl-compat.d from ../../../../R/src/extra/intl/intl-compat.c making hash-string.d from ../../../../R/src/extra/intl/hash-string.c making lock.d from ../../../../R/src/extra/intl/lock.c gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/bindtextdom.c -o bindtextdom.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/dcgettext.c -o dcgettext.o gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/tre-match-approx.c -o tre-match-approx.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/dgettext.c -o dgettext.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/gettext.c -o gettext.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/finddomain.c -o finddomain.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/loadmsgcat.c -o loadmsgcat.o gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/tre-match-backtrack.c -o tre-match-backtrack.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/textdomain.c -o textdomain.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/l10nflist.c -o l10nflist.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/explodename.c -o explodename.o gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/tre-match-parallel.c -o tre-match-parallel.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/dcigettext.c -o dcigettext.o gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/tre-mem.c -o tre-mem.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/dcngettext.c -o dcngettext.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/dngettext.c -o dngettext.o gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/tre-parse.c -o tre-parse.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/ngettext.c -o ngettext.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/plural.c -o plural.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/plural-exp.c -o plural-exp.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/langprefs.c -o langprefs.o gcc -I../../../../R/src/extra/tre -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../../R/src/extra/tre/tre-stack.c -o tre-stack.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/localcharset.c -o localcharset.o ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o ranlib libtre.a gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/localename.c -o localename.o gfortran -fPIC -g -O2 -c ../../../../R/src/extra/blas/cmplxblas2.f90 -o cmplxblas2.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/printf.c -o printf.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/osdep.c -o osdep.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/intl-compat.c -o intl-compat.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/hash-string.c -o hash-string.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/intl/lock.c -o lock.o ar -cr libintl.a bindtextdom.o dcgettext.o dgettext.o gettext.o finddomain.o loadmsgcat.o textdomain.o l10nflist.o explodename.o dcigettext.o dcngettext.o dngettext.o ngettext.o plural.o plural-exp.o langprefs.o localcharset.o localename.o printf.o osdep.o intl-compat.o hash-string.o lock.o /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libintl.a(printf.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libintl.a(osdep.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libintl.a(lock.o) has no symbols ranlib libintl.a /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libintl.a(printf.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libintl.a(osdep.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libintl.a(lock.o) has no symbols config.status: creating src/extra/tzone/Makefile making localtime.d from ../../../../R/src/extra/tzone/localtime.c making strftime.d from ../../../../R/src/extra/tzone/strftime.c gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/tzone -I../../../../R/src/main -I/usr/local/include -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/tzone/localtime.c -o localtime.o gcc -I. -I../../../src/include -I../../../../R/src/include -I../../../../R/src/extra/tzone -I../../../../R/src/main -I/usr/local/include -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -g -O2 -c ../../../../R/src/extra/tzone/strftime.c -o strftime.o ar -cr libtz.a localtime.o strftime.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o libRblas.dylib blas.o blas2.o cmplxblas.o cmplxblas2.o -install_name libRblas.dylib -headerpad_max_install_names -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir /Users/pd/r-devel/BUILD-dist/lib config.status: creating src/appl/Makefile making integrate.d from ../../../R/src/appl/integrate.c making interv.d from ../../../R/src/appl/interv.c making maxcol.d from ../../../R/src/appl/maxcol.c making optim.d from ../../../R/src/appl/optim.c making pretty.d from ../../../R/src/appl/pretty.c making uncmin.d from ../../../R/src/appl/uncmin.c gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/appl/integrate.c -o integrate.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/appl/interv.c -o interv.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/appl/maxcol.c -o maxcol.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/appl/optim.c -o optim.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/appl/pretty.c -o pretty.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/appl/uncmin.c -o uncmin.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dchdc.f -o dchdc.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dpbfa.f -o dpbfa.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dpbsl.f -o dpbsl.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dpoco.f -o dpoco.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dpodi.f -o dpodi.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dpofa.f -o dpofa.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dposl.f -o dposl.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dqrdc.f -o dqrdc.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dqrdc2.f -o dqrdc2.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dqrls.f -o dqrls.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dqrsl.f -o dqrsl.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dqrutl.f -o dqrutl.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dsvdc.f -o dsvdc.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dtrco.f -o dtrco.o gfortran -fPIE -g -O2 -c ../../../R/src/appl/dtrsl.f -o dtrsl.o ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a config.status: creating src/nmath/Makefile making mlutils.d from ../../../R/src/nmath/mlutils.c making d1mach.d from ../../../R/src/nmath/d1mach.c making i1mach.d from ../../../R/src/nmath/i1mach.c making fmax2.d from ../../../R/src/nmath/fmax2.c making fmin2.d from ../../../R/src/nmath/fmin2.c making fprec.d from ../../../R/src/nmath/fprec.c making fround.d from ../../../R/src/nmath/fround.c making ftrunc.d from ../../../R/src/nmath/ftrunc.c making sign.d from ../../../R/src/nmath/sign.c making fsign.d from ../../../R/src/nmath/fsign.c making imax2.d from ../../../R/src/nmath/imax2.c making imin2.d from ../../../R/src/nmath/imin2.c making chebyshev.d from ../../../R/src/nmath/chebyshev.c making log1p.d from ../../../R/src/nmath/log1p.c making lgammacor.d from ../../../R/src/nmath/lgammacor.c making gammalims.d from ../../../R/src/nmath/gammalims.c making stirlerr.d from ../../../R/src/nmath/stirlerr.c making bd0.d from ../../../R/src/nmath/bd0.c making gamma.d from ../../../R/src/nmath/gamma.c making lgamma.d from ../../../R/src/nmath/lgamma.c making beta.d from ../../../R/src/nmath/beta.c making gamma_cody.d from ../../../R/src/nmath/gamma_cody.c making lbeta.d from ../../../R/src/nmath/lbeta.c making polygamma.d from ../../../R/src/nmath/polygamma.c making cospi.d from ../../../R/src/nmath/cospi.c making bessel_j.d from ../../../R/src/nmath/bessel_j.c making bessel_i.d from ../../../R/src/nmath/bessel_i.c making bessel_k.d from ../../../R/src/nmath/bessel_k.c making bessel_y.d from ../../../R/src/nmath/bessel_y.c making choose.d from ../../../R/src/nmath/choose.c making snorm.d from ../../../R/src/nmath/snorm.c making sexp.d from ../../../R/src/nmath/sexp.c making dgamma.d from ../../../R/src/nmath/dgamma.c making pgamma.d from ../../../R/src/nmath/pgamma.c making qgamma.d from ../../../R/src/nmath/qgamma.c making rgamma.d from ../../../R/src/nmath/rgamma.c making dbeta.d from ../../../R/src/nmath/dbeta.c making pbeta.d from ../../../R/src/nmath/pbeta.c making qbeta.d from ../../../R/src/nmath/qbeta.c making rbeta.d from ../../../R/src/nmath/rbeta.c making dunif.d from ../../../R/src/nmath/dunif.c making punif.d from ../../../R/src/nmath/punif.c making qunif.d from ../../../R/src/nmath/qunif.c making runif.d from ../../../R/src/nmath/runif.c making dnorm.d from ../../../R/src/nmath/dnorm.c making pnorm.d from ../../../R/src/nmath/pnorm.c making qnorm.d from ../../../R/src/nmath/qnorm.c making rnorm.d from ../../../R/src/nmath/rnorm.c making dlnorm.d from ../../../R/src/nmath/dlnorm.c making plnorm.d from ../../../R/src/nmath/plnorm.c making qlnorm.d from ../../../R/src/nmath/qlnorm.c making rlnorm.d from ../../../R/src/nmath/rlnorm.c making df.d from ../../../R/src/nmath/df.c making pf.d from ../../../R/src/nmath/pf.c making qf.d from ../../../R/src/nmath/qf.c making rf.d from ../../../R/src/nmath/rf.c making dnf.d from ../../../R/src/nmath/dnf.c making dt.d from ../../../R/src/nmath/dt.c making pt.d from ../../../R/src/nmath/pt.c making qt.d from ../../../R/src/nmath/qt.c making rt.d from ../../../R/src/nmath/rt.c making dnt.d from ../../../R/src/nmath/dnt.c making pchisq.d from ../../../R/src/nmath/pchisq.c making dchisq.d from ../../../R/src/nmath/dchisq.c making qchisq.d from ../../../R/src/nmath/qchisq.c making rnchisq.d from ../../../R/src/nmath/rnchisq.c making rchisq.d from ../../../R/src/nmath/rchisq.c making dbinom.d from ../../../R/src/nmath/dbinom.c making pbinom.d from ../../../R/src/nmath/pbinom.c making qbinom.d from ../../../R/src/nmath/qbinom.c making rbinom.d from ../../../R/src/nmath/rbinom.c making rmultinom.d from ../../../R/src/nmath/rmultinom.c making dcauchy.d from ../../../R/src/nmath/dcauchy.c making pcauchy.d from ../../../R/src/nmath/pcauchy.c making rcauchy.d from ../../../R/src/nmath/rcauchy.c making qcauchy.d from ../../../R/src/nmath/qcauchy.c making dexp.d from ../../../R/src/nmath/dexp.c making pexp.d from ../../../R/src/nmath/pexp.c making qexp.d from ../../../R/src/nmath/qexp.c making rexp.d from ../../../R/src/nmath/rexp.c making dgeom.d from ../../../R/src/nmath/dgeom.c making pgeom.d from ../../../R/src/nmath/pgeom.c making qgeom.d from ../../../R/src/nmath/qgeom.c making rgeom.d from ../../../R/src/nmath/rgeom.c making dhyper.d from ../../../R/src/nmath/dhyper.c making phyper.d from ../../../R/src/nmath/phyper.c making qhyper.d from ../../../R/src/nmath/qhyper.c making rhyper.d from ../../../R/src/nmath/rhyper.c making dnbinom.d from ../../../R/src/nmath/dnbinom.c making pnbinom.d from ../../../R/src/nmath/pnbinom.c making qnbinom.d from ../../../R/src/nmath/qnbinom.c making qnbinom_mu.d from ../../../R/src/nmath/qnbinom_mu.c making rnbinom.d from ../../../R/src/nmath/rnbinom.c making dpois.d from ../../../R/src/nmath/dpois.c making ppois.d from ../../../R/src/nmath/ppois.c making qpois.d from ../../../R/src/nmath/qpois.c making rpois.d from ../../../R/src/nmath/rpois.c making dweibull.d from ../../../R/src/nmath/dweibull.c making pweibull.d from ../../../R/src/nmath/pweibull.c making qweibull.d from ../../../R/src/nmath/qweibull.c making rweibull.d from ../../../R/src/nmath/rweibull.c making dlogis.d from ../../../R/src/nmath/dlogis.c making plogis.d from ../../../R/src/nmath/plogis.c making qlogis.d from ../../../R/src/nmath/qlogis.c making rlogis.d from ../../../R/src/nmath/rlogis.c making dnchisq.d from ../../../R/src/nmath/dnchisq.c making pnchisq.d from ../../../R/src/nmath/pnchisq.c making qnchisq.d from ../../../R/src/nmath/qnchisq.c making dnbeta.d from ../../../R/src/nmath/dnbeta.c making pnbeta.d from ../../../R/src/nmath/pnbeta.c making qnbeta.d from ../../../R/src/nmath/qnbeta.c making pnf.d from ../../../R/src/nmath/pnf.c making pnt.d from ../../../R/src/nmath/pnt.c making qnf.d from ../../../R/src/nmath/qnf.c making qnt.d from ../../../R/src/nmath/qnt.c making ptukey.d from ../../../R/src/nmath/ptukey.c making qtukey.d from ../../../R/src/nmath/qtukey.c making toms708.d from ../../../R/src/nmath/toms708.c making wilcox.d from ../../../R/src/nmath/wilcox.c making signrank.d from ../../../R/src/nmath/signrank.c gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/mlutils.c -o mlutils.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/d1mach.c -o d1mach.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/i1mach.c -o i1mach.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/fmax2.c -o fmax2.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/fmin2.c -o fmin2.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/fprec.c -o fprec.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/fround.c -o fround.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/ftrunc.c -o ftrunc.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/sign.c -o sign.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/fsign.c -o fsign.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/imax2.c -o imax2.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/imin2.c -o imin2.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/chebyshev.c -o chebyshev.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/log1p.c -o log1p.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/lgammacor.c -o lgammacor.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/gammalims.c -o gammalims.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/stirlerr.c -o stirlerr.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/bd0.c -o bd0.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/gamma.c -o gamma.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/lgamma.c -o lgamma.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/gamma_cody.c -o gamma_cody.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/beta.c -o beta.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/lbeta.c -o lbeta.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/polygamma.c -o polygamma.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/cospi.c -o cospi.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/bessel_i.c -o bessel_i.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/bessel_j.c -o bessel_j.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/bessel_k.c -o bessel_k.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/bessel_y.c -o bessel_y.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/choose.c -o choose.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/snorm.c -o snorm.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/sexp.c -o sexp.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dgamma.c -o dgamma.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pgamma.c -o pgamma.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qgamma.c -o qgamma.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rgamma.c -o rgamma.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dbeta.c -o dbeta.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pbeta.c -o pbeta.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qbeta.c -o qbeta.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rbeta.c -o rbeta.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dunif.c -o dunif.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/punif.c -o punif.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qunif.c -o qunif.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/runif.c -o runif.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dnorm.c -o dnorm.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pnorm.c -o pnorm.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qnorm.c -o qnorm.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rnorm.c -o rnorm.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dlnorm.c -o dlnorm.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/plnorm.c -o plnorm.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qlnorm.c -o qlnorm.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rlnorm.c -o rlnorm.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/df.c -o df.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pf.c -o pf.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qf.c -o qf.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rf.c -o rf.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dnf.c -o dnf.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dt.c -o dt.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pt.c -o pt.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qt.c -o qt.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rt.c -o rt.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dnt.c -o dnt.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dchisq.c -o dchisq.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pchisq.c -o pchisq.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qchisq.c -o qchisq.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rchisq.c -o rchisq.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rnchisq.c -o rnchisq.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dbinom.c -o dbinom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pbinom.c -o pbinom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qbinom.c -o qbinom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rbinom.c -o rbinom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rmultinom.c -o rmultinom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dcauchy.c -o dcauchy.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pcauchy.c -o pcauchy.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qcauchy.c -o qcauchy.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rcauchy.c -o rcauchy.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dexp.c -o dexp.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pexp.c -o pexp.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qexp.c -o qexp.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rexp.c -o rexp.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dgeom.c -o dgeom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pgeom.c -o pgeom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qgeom.c -o qgeom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rgeom.c -o rgeom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dhyper.c -o dhyper.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/phyper.c -o phyper.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qhyper.c -o qhyper.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rhyper.c -o rhyper.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dnbinom.c -o dnbinom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pnbinom.c -o pnbinom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qnbinom.c -o qnbinom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rnbinom.c -o rnbinom.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dpois.c -o dpois.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/ppois.c -o ppois.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qpois.c -o qpois.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rpois.c -o rpois.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dweibull.c -o dweibull.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pweibull.c -o pweibull.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qweibull.c -o qweibull.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rweibull.c -o rweibull.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dlogis.c -o dlogis.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/plogis.c -o plogis.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qlogis.c -o qlogis.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/rlogis.c -o rlogis.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dnchisq.c -o dnchisq.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pnchisq.c -o pnchisq.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qnchisq.c -o qnchisq.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/dnbeta.c -o dnbeta.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pnbeta.c -o pnbeta.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qnbeta.c -o qnbeta.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pnf.c -o pnf.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/pnt.c -o pnt.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qnf.c -o qnf.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qnt.c -o qnt.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/ptukey.c -o ptukey.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/qtukey.c -o qtukey.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/toms708.c -o toms708.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/wilcox.c -o wilcox.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/nmath/signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libnmath.a(mlutils.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libnmath.a(log1p.o) has no symbols ranlib libnmath.a /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libnmath.a(mlutils.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: libnmath.a(log1p.o) has no symbols config.status: creating src/unix/Makefile making Rembedded.d from ../../../R/src/unix/Rembedded.c making dynload.d from ../../../R/src/unix/dynload.c making system.d from ../../../R/src/unix/system.c making sys-unix.d from ../../../R/src/unix/sys-unix.c making sys-std.d from ../../../R/src/unix/sys-std.c making X11.d from ../../../R/src/unix/X11.c gcc -I. -I../../src/include -I../../../R/src/include -I/usr/X11/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/unix/Rembedded.c -o Rembedded.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/X11/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/unix/dynload.c -o dynload.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/X11/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/unix/system.c -o system.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/X11/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/unix/sys-unix.c -o sys-unix.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/X11/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/unix/sys-std.c -o sys-std.o gcc -I. -I../../src/include -I../../../R/src/include -I/usr/X11/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/unix/X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a gcc -I. -I../../src/include -I../../../R/src/include -I/usr/X11/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -L/usr/local/lib -DR_HOME='"/Users/pd/r-devel/BUILD-dist"' \ -o Rscript ../../../R/src/unix/Rscript.c re-making gram.c bison -y -l ../../../R/src/main/gram.y ../../../R/src/main/gram.y:1.1-7: warning: POSIX Yacc does not support %define [-Wyacc] 1 | %define parse.error verbose | ^~~~~~~ ../../../R/src/main/gram.y:399.1-12: warning: POSIX Yacc does not support %token-table [-Wyacc] 399 | %token-table | ^~~~~~~~~~~~ ../../../R/src/main/gram.y: warning: 27 shift/reduce conflicts [-Wconflicts-sr] ../../../R/src/main/gram.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples /bin/sh ../../../R/tools/move-if-change y.tab.c ../../../R/src/main/gram.c config.status: creating src/main/Makefile making CommandLineArgs.d from ../../../R/src/main/CommandLineArgs.c making Renviron.d from ../../../R/src/main/Renviron.c making Rdynload.d from ../../../R/src/main/Rdynload.c making RNG.d from ../../../R/src/main/RNG.c making agrep.d from ../../../R/src/main/agrep.c making altclasses.d from ../../../R/src/main/altclasses.c making altrep.d from ../../../R/src/main/altrep.c making apply.d from ../../../R/src/main/apply.c making arithmetic.d from ../../../R/src/main/arithmetic.c making array.d from ../../../R/src/main/array.c making attrib.d from ../../../R/src/main/attrib.c making bind.d from ../../../R/src/main/bind.c making builtin.d from ../../../R/src/main/builtin.c making character.d from ../../../R/src/main/character.c making clippath.d from ../../../R/src/main/clippath.c making coerce.d from ../../../R/src/main/coerce.c making colors.d from ../../../R/src/main/colors.c making complex.d from ../../../R/src/main/complex.c making connections.d from ../../../R/src/main/connections.c making context.d from ../../../R/src/main/context.c making cum.d from ../../../R/src/main/cum.c making dcf.d from ../../../R/src/main/dcf.c making datetime.d from ../../../R/src/main/datetime.c making debug.d from ../../../R/src/main/debug.c making deparse.d from ../../../R/src/main/deparse.c making devices.d from ../../../R/src/main/devices.c making dotcode.d from ../../../R/src/main/dotcode.c making dounzip.d from ../../../R/src/main/dounzip.c making dstruct.d from ../../../R/src/main/dstruct.c making duplicate.d from ../../../R/src/main/duplicate.c making edit.d from ../../../R/src/main/edit.c making engine.d from ../../../R/src/main/engine.c making envir.d from ../../../R/src/main/envir.c making errors.d from ../../../R/src/main/errors.c making flexiblas.d from ../../../R/src/main/flexiblas.c making eval.d from ../../../R/src/main/eval.c making format.d from ../../../R/src/main/format.c making gevents.d from ../../../R/src/main/gevents.c making gram.d from ../../../R/src/main/gram.c making gram-ex.d from ../../../R/src/main/gram-ex.c making graphics.d from ../../../R/src/main/graphics.c making grep.d from ../../../R/src/main/grep.c making identical.d from ../../../R/src/main/identical.c making inlined.d from ../../../R/src/main/inlined.c making inspect.d from ../../../R/src/main/inspect.c making internet.d from ../../../R/src/main/internet.c making iosupport.d from ../../../R/src/main/iosupport.c making lapack.d from ../../../R/src/main/lapack.c making list.d from ../../../R/src/main/list.c making localecharset.d from ../../../R/src/main/localecharset.c making logic.d from ../../../R/src/main/logic.c making machine.d from ../../../R/src/main/machine.c making main.d from ../../../R/src/main/main.c making mapply.d from ../../../R/src/main/mapply.c making mask.d from ../../../R/src/main/mask.c making match.d from ../../../R/src/main/match.c making memory.d from ../../../R/src/main/memory.c making names.d from ../../../R/src/main/names.c making objects.d from ../../../R/src/main/objects.c making options.d from ../../../R/src/main/options.c making paste.d from ../../../R/src/main/paste.c making patterns.d from ../../../R/src/main/patterns.c making platform.d from ../../../R/src/main/platform.c making plot.d from ../../../R/src/main/plot.c making plot3d.d from ../../../R/src/main/plot3d.c making plotmath.d from ../../../R/src/main/plotmath.c making print.d from ../../../R/src/main/print.c making printarray.d from ../../../R/src/main/printarray.c making printvector.d from ../../../R/src/main/printvector.c making printutils.d from ../../../R/src/main/printutils.c making qsort.d from ../../../R/src/main/qsort.c making radixsort.d from ../../../R/src/main/radixsort.c making random.d from ../../../R/src/main/random.c making raw.d from ../../../R/src/main/raw.c making registration.d from ../../../R/src/main/registration.c making relop.d from ../../../R/src/main/relop.c making rlocale.d from ../../../R/src/main/rlocale.c making saveload.d from ../../../R/src/main/saveload.c making scan.d from ../../../R/src/main/scan.c making seq.d from ../../../R/src/main/seq.c making serialize.d from ../../../R/src/main/serialize.c making sort.d from ../../../R/src/main/sort.c making source.d from ../../../R/src/main/source.c making split.d from ../../../R/src/main/split.c making sprintf.d from ../../../R/src/main/sprintf.c making startup.d from ../../../R/src/main/startup.c making subassign.d from ../../../R/src/main/subassign.c making subscript.d from ../../../R/src/main/subscript.c making subset.d from ../../../R/src/main/subset.c making summary.d from ../../../R/src/main/summary.c making sysutils.d from ../../../R/src/main/sysutils.c making times.d from ../../../R/src/main/times.c making unique.d from ../../../R/src/main/unique.c making util.d from ../../../R/src/main/util.c making version.d from ../../../R/src/main/version.c making g_alab_her.d from ../../../R/src/main/g_alab_her.c making g_cntrlify.d from ../../../R/src/main/g_cntrlify.c making g_fontdb.d from ../../../R/src/main/g_fontdb.c making g_her_glyph.d from ../../../R/src/main/g_her_glyph.c making Rmain.d from ../../../R/src/main/Rmain.c making alloca.d from ../../../R/src/main/alloca.c making mkdtemp.d from ../../../R/src/main/mkdtemp.c making strdup.d from ../../../R/src/main/strdup.c making strncasecmp.d from ../../../R/src/main/strncasecmp.c gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/Rmain.c -o Rmain.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/CommandLineArgs.c -o CommandLineArgs.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/Rdynload.c -o Rdynload.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/Renviron.c -o Renviron.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/RNG.c -o RNG.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/agrep.c -o agrep.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/altclasses.c -o altclasses.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/altrep.c -o altrep.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/apply.c -o apply.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/arithmetic.c -o arithmetic.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/array.c -o array.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/attrib.c -o attrib.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/bind.c -o bind.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/builtin.c -o builtin.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/character.c -o character.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/clippath.c -o clippath.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/coerce.c -o coerce.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/colors.c -o colors.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/complex.c -o complex.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/connections.c -o connections.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/context.c -o context.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/cum.c -o cum.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/dcf.c -o dcf.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/datetime.c -o datetime.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/debug.c -o debug.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/deparse.c -o deparse.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/devices.c -o devices.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/dotcode.c -o dotcode.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/dounzip.c -o dounzip.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/dstruct.c -o dstruct.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/duplicate.c -o duplicate.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/edit.c -o edit.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/engine.c -o engine.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/envir.c -o envir.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/errors.c -o errors.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/eval.c -o eval.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/flexiblas.c -o flexiblas.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/format.c -o format.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/gevents.c -o gevents.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/gram.c -o gram.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/gram-ex.c -o gram-ex.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/graphics.c -o graphics.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/grep.c -o grep.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/identical.c -o identical.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/inlined.c -o inlined.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/inspect.c -o inspect.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/internet.c -o internet.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/iosupport.c -o iosupport.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/lapack.c -o lapack.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/list.c -o list.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/localecharset.c -o localecharset.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/logic.c -o logic.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/machine.c -o machine.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/main.c -o main.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/mapply.c -o mapply.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/mask.c -o mask.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/match.c -o match.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/memory.c -o memory.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/names.c -o names.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/objects.c -o objects.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/options.c -o options.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/paste.c -o paste.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/patterns.c -o patterns.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/platform.c -o platform.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/plot.c -o plot.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/plot3d.c -o plot3d.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/plotmath.c -o plotmath.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/print.c -o print.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/printarray.c -o printarray.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/printvector.c -o printvector.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/printutils.c -o printutils.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/qsort.c -o qsort.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/radixsort.c -o radixsort.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/random.c -o random.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/raw.c -o raw.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/registration.c -o registration.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/relop.c -o relop.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/rlocale.c -o rlocale.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/saveload.c -o saveload.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/scan.c -o scan.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/seq.c -o seq.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/serialize.c -o serialize.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/sort.c -o sort.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/source.c -o source.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/split.c -o split.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/sprintf.c -o sprintf.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/startup.c -o startup.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/subassign.c -o subassign.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/subscript.c -o subscript.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/subset.c -o subset.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/summary.c -o summary.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/sysutils.c -o sysutils.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/times.c -o times.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/unique.c -o unique.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/util.c -o util.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/version.c -o version.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/g_alab_her.c -o g_alab_her.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/g_cntrlify.c -o g_cntrlify.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/g_fontdb.c -o g_fontdb.o gcc -I../../../R/src/extra -I../../../R/src/extra/xdr -I. -I../../src/include -I../../../R/src/include -I/usr/local/include -I../../../R/src/nmath -DHAVE_CONFIG_H -g -O2 -c ../../../R/src/main/g_her_glyph.c -o g_her_glyph.o gfortran -fPIE -g -O2 -c ../../../R/src/main/xxxpr.f -o xxxpr.o gcc -L/usr/local/lib -o R.bin Rmain.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o clippath.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o flexiblas.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o machine.o main.o mapply.o mask.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a ../extra/xdr/libxdr.a ../extra/intl/libintl.a ../extra/tzone/libtz.a -L"../../lib" -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -Wl,-framework -Wl,CoreFoundation -lreadline -lncurses -L/opt/R/x86_64/lib -lpcre2-8 -llzma -lbz2 -lz -licucore -ldl -lm -liconv mkdir /Users/pd/r-devel/BUILD-dist/bin/exec config.status: creating src/modules/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/X11/Makefile making devX11.d from ../../../../R/src/modules/X11/devX11.c making Rhttpd.d from ../../../../R/src/modules/internet/Rhttpd.c making Lapack.d from ../../../../R/src/modules/lapack/Lapack.c making rotated.d from ../../../../R/src/modules/X11/rotated.c making rbitmap.d from ../../../../R/src/modules/X11/rbitmap.c making Rsock.d from ../../../../R/src/modules/internet/Rsock.c gfortran -fPIC -g -O2 -msse2 -mfpmath=sse -c ../../../../R/src/modules/lapack/dlamch.f -o dlamch.o gfortran -fPIC -g -O2 -c ../../../../R/src/modules/lapack/dlapack.f -o dlapack.o making internet.d from ../../../../R/src/modules/internet/internet.c making libcurl.d from ../../../../R/src/modules/internet/libcurl.c gfortran -fPIC -g -O2 -c ../../../../R/src/modules/lapack/cmplx.f -o cmplx.o making sock.d from ../../../../R/src/modules/internet/sock.c gcc -I/opt/R/x86_64/include/libpng16 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/webp -I/opt/R/x86_64/include -I. -I../../../src/include -I../../../../R/src/include -I/usr/X11/include -DFRIBIDI_LIB_STATIC -DPCRE2_STATIC -I/opt/R/x86_64/include/pango-1.0 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/fribidi -I/opt/R/x86_64/include/cairo -I/opt/X11/include -I/opt/R/x86_64/include/cairo -I/opt/R/x86_64/include -I/opt/R/x86_64/include/pixman-1 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/freetype2 -I/opt/R/x86_64/include/harfbuzz -I/opt/R/x86_64/include/glib-2.0 -I/opt/R/x86_64/lib/glib-2.0/include -I/opt/R/x86_64/include -I/opt/R/x86_64/include/libpng16 -I../../../../R/src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ../../../../R/src/modules/X11/devX11.c -o devX11.o making sockconn.d from ../../../../R/src/modules/internet/sockconn.c gcc -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -fvisibility=hidden -c ../../../../R/src/modules/internet/Rhttpd.c -o Rhttpd.o gcc -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -fvisibility=hidden -c ../../../../R/src/modules/internet/Rsock.c -o Rsock.o gcc -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -fvisibility=hidden -c ../../../../R/src/modules/internet/internet.c -o internet.o gcc -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -fvisibility=hidden -c ../../../../R/src/modules/internet/libcurl.c -o libcurl.o gcc -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -fvisibility=hidden -c ../../../../R/src/modules/internet/sock.c -o sock.o gcc -I/opt/R/x86_64/include/libpng16 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/webp -I/opt/R/x86_64/include -I. -I../../../src/include -I../../../../R/src/include -I/usr/X11/include -DFRIBIDI_LIB_STATIC -DPCRE2_STATIC -I/opt/R/x86_64/include/pango-1.0 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/fribidi -I/opt/R/x86_64/include/cairo -I/opt/X11/include -I/opt/R/x86_64/include/cairo -I/opt/R/x86_64/include -I/opt/R/x86_64/include/pixman-1 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/freetype2 -I/opt/R/x86_64/include/harfbuzz -I/opt/R/x86_64/include/glib-2.0 -I/opt/R/x86_64/lib/glib-2.0/include -I/opt/R/x86_64/include -I/opt/R/x86_64/include/libpng16 -I../../../../R/src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ../../../../R/src/modules/X11/rotated.c -o rotated.o gcc -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -fvisibility=hidden -c ../../../../R/src/modules/internet/sockconn.c -o sockconn.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o sock.o sockconn.o -lcurl -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir /Users/pd/r-devel/BUILD-dist/modules gfortran -fPIC -g -O2 -c ../../../../R/src/modules/lapack/la_constants.f90 -o la_constants.o gcc -I/opt/R/x86_64/include/libpng16 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/webp -I/opt/R/x86_64/include -I. -I../../../src/include -I../../../../R/src/include -I/usr/X11/include -DFRIBIDI_LIB_STATIC -DPCRE2_STATIC -I/opt/R/x86_64/include/pango-1.0 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/fribidi -I/opt/R/x86_64/include/cairo -I/opt/X11/include -I/opt/R/x86_64/include/cairo -I/opt/R/x86_64/include -I/opt/R/x86_64/include/pixman-1 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/freetype2 -I/opt/R/x86_64/include/harfbuzz -I/opt/R/x86_64/include/glib-2.0 -I/opt/R/x86_64/lib/glib-2.0/include -I/opt/R/x86_64/include -I/opt/R/x86_64/include/libpng16 -I../../../../R/src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ../../../../R/src/modules/X11/rbitmap.c -o rbitmap.o gfortran -fPIC -g -O2 -c ../../../../R/src/modules/lapack/dlartg.f90 -o dlartg.o gcc -I/opt/R/x86_64/include/libpng16 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/webp -I/opt/R/x86_64/include -I. -I../../../src/include -I../../../../R/src/include -I/usr/X11/include -DFRIBIDI_LIB_STATIC -DPCRE2_STATIC -I/opt/R/x86_64/include/pango-1.0 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/fribidi -I/opt/R/x86_64/include/cairo -I/opt/X11/include -I/opt/R/x86_64/include/cairo -I/opt/R/x86_64/include -I/opt/R/x86_64/include/pixman-1 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/freetype2 -I/opt/R/x86_64/include/harfbuzz -I/opt/R/x86_64/include/glib-2.0 -I/opt/R/x86_64/lib/glib-2.0/include -I/opt/R/x86_64/include -I/opt/R/x86_64/include/libpng16 -I../../../../R/src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ../../../../R/src/modules/X11/dataentry.c -o dataentry.o gfortran -fPIC -g -O2 -c ../../../../R/src/modules/lapack/la_xisnan.f90 -o la_xisnan.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o R_X11.so devX11.o rotated.o rbitmap.o -L/opt/R/x86_64/lib -ltiff -lwebp -lzstd -llzma -ljpeg -lz -lwebp -lm -D_THREAD_SAFE -pthread -lsharpyuv -lm -D_THREAD_SAFE -pthread -lzstd -pthread -llzma -pthread -lpthread -ljpeg -lz -L/opt/R/x86_64/lib -ljpeg -L/opt/R/x86_64/lib -lpng16 -lz -lSM -lICE -L/opt/R/x86_64/lib -L/opt/X11/lib -L/opt/R/x86_64/lib -L/opt/X11/lib -L/opt/R/x86_64/lib -lpangocairo-1.0 -lm -framework CoreFoundation -framework ApplicationServices -lpangoft2-1.0 -lm -framework CoreFoundation -framework ApplicationServices -lpango-1.0 -lm -framework CoreFoundation -framework ApplicationServices -lgio-2.0 -lintl -framework Foundation -framework CoreFoundation -framework AppKit -lresolv -lgmodule-2.0 -lintl -lfribidi -lz -lSM -lICE -lX11 -lXext -lcairo -lz -lXrender -lSM -lICE -lX11 -lXext -lgobject-2.0 -lintl -lffi -lpixman-1 -lfontconfig -lexpat -lfreetype -lbz2 -lharfbuzz -lm -lglib-2.0 -lintl -lm -framework Foundation -framework CoreFoundation -framework AppKit -framework Carbon -lpcre2-8 -lpng16 -lz -L/usr/X11/lib -lX11 -lXt -lXmu -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups gfortran -fPIC -g -O2 -c ../../../../R/src/modules/lapack/zlartg.f90 -o zlartg.o gfortran -fPIC -g -O2 -c ../../../../R/src/modules/lapack/zlassq.f90 -o zlassq.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o R_de.so dataentry.o -lSM -lICE -L/opt/R/x86_64/lib -L/opt/X11/lib -L/opt/R/x86_64/lib -L/opt/X11/lib -L/opt/R/x86_64/lib -lpangocairo-1.0 -lm -framework CoreFoundation -framework ApplicationServices -lpangoft2-1.0 -lm -framework CoreFoundation -framework ApplicationServices -lpango-1.0 -lm -framework CoreFoundation -framework ApplicationServices -lgio-2.0 -lintl -framework Foundation -framework CoreFoundation -framework AppKit -lresolv -lgmodule-2.0 -lintl -lfribidi -lz -lSM -lICE -lX11 -lXext -lcairo -lz -lXrender -lSM -lICE -lX11 -lXext -lgobject-2.0 -lintl -lffi -lpixman-1 -lfontconfig -lexpat -lfreetype -lbz2 -lharfbuzz -lm -lglib-2.0 -lintl -lm -framework Foundation -framework CoreFoundation -framework AppKit -framework Carbon -lpcre2-8 -lpng16 -lz -L/usr/X11/lib -lX11 -lXt -lXmu -Wl,-framework -Wl,CoreFoundation gfortran -fPIC -g -O2 -c ../../../../R/src/modules/lapack/dlassq.f90 -o dlassq.o ld: warning: -undefined dynamic_lookup may not work with chained fixups gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o libRlapack.dylib dlamch.o dlapack.o cmplx.o dlartg.o dlassq.o la_constants.o la_xisnan.o zlartg.o zlassq.o -install_name libRlapack.dylib -compatibility_version 4.5.0 -current_version 4.5.0 -headerpad_max_install_names -L"../../../lib" -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath ld: warning: -undefined dynamic_lookup may not work with chained fixups ld: warning: could not create compact unwind for _zhseqr_: stack subq instruction is too different from dwarf stack size ld: warning: could not create compact unwind for _zpbtrf_: stack subq instruction is too different from dwarf stack size ld: warning: could not create compact unwind for _dpbtrf_: stack subq instruction is too different from dwarf stack size ld: warning: could not create compact unwind for _dhseqr_: stack subq instruction is too different from dwarf stack size ld: warning: could not create compact unwind for _dgbtrf_: stack subq instruction is too different from dwarf stack size gcc -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ../../../../R/src/modules/lapack/Lapack.c -o Lapack.o gcc -I. -I../../../src/include -I../../../../R/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ../../../../R/src/modules/lapack/../../main/flexiblas.c -o flexiblas.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o lapack.so Lapack.o flexiblas.o -Wl,-framework -Wl,CoreFoundation -L"../../../lib" -lRlapack -L"../../../lib" -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath ld: warning: -undefined dynamic_lookup may not work with chained fixups /Users/pd/r-devel/BUILD-dist/lib/libRlapack.dylib is unchanged config.status: creating src/library/Makefile mkdir ../../library config.status: creating src/library/profile/Makefile building system startup profile mkdir ../../../library/base mkdir ../../../library/base/R config.status: creating src/library/translations/Makefile building package 'translations' mkdir ../../../library/translations config.status: creating src/library/base/Makefile config.status: creating src/library/base/DESCRIPTION building package 'base' mkdir ../../../library/base/demo config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/DESCRIPTION building package 'tools' mkdir ../../../library/tools mkdir ../../../library/tools/R config.status: creating src/library/tools/src/Makefile making text.d from ../../../../../R/src/library/tools/src/text.c making init.d from ../../../../../R/src/library/tools/src/init.c making Rmd5.d from ../../../../../R/src/library/tools/src/Rmd5.c making md5.d from ../../../../../R/src/library/tools/src/md5.c making signals.d from ../../../../../R/src/library/tools/src/signals.c making install.d from ../../../../../R/src/library/tools/src/install.c making getfmts.d from ../../../../../R/src/library/tools/src/getfmts.c making http.d from ../../../../../R/src/library/tools/src/http.c re-making gramRd.c bison -y -l ../../../../../R/src/library/tools/src/gramRd.y making pdscan.d from ../../../../../R/src/library/tools/src/pdscan.c making Rsha256.d from ../../../../../R/src/library/tools/src/Rsha256.c making sha256.d from ../../../../../R/src/library/tools/src/sha256.c ../../../../../R/src/library/tools/src/gramRd.y:1.1-7: warning: POSIX Yacc does not support %define [-Wyacc] 1 | %define parse.error verbose | ^~~~~~~ ../../../../../R/src/library/tools/src/gramRd.y:199.1-12: warning: POSIX Yacc does not support %token-table [-Wyacc] 199 | %token-table | ^~~~~~~~~~~~ ../../../../../R/src/library/tools/src/gramRd.y:220.1-11: warning: POSIX Yacc does not support %destructor [-Wyacc] 220 | %destructor { RELEASE_SV($$); } SECTIONHEADER RSECTIONHEADER | ^~~~~~~~~~~ ../../../../../R/src/library/tools/src/gramRd.y: warning: 54 shift/reduce conflicts [-Wconflicts-sr] ../../../../../R/src/library/tools/src/gramRd.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/text.c -o text.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/Rmd5.c -o Rmd5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/md5.c -o md5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/signals.c -o signals.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/install.c -o install.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/getfmts.c -o getfmts.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/http.c -o http.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/pdscan.c -o pdscan.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/Rsha256.c -o Rsha256.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/sha256.c -o sha256.o /bin/sh ../../../../../R/tools/move-if-change y.tab.c ../../../../../R/src/library/tools/src/gramRd.c re-making gramLatex.c bison -y -l ../../../../../R/src/library/tools/src/gramLatex.y ../../../../../R/src/library/tools/src/gramLatex.y:1.1-7: warning: POSIX Yacc does not support %define [-Wyacc] 1 | %define parse.error verbose | ^~~~~~~ ../../../../../R/src/library/tools/src/gramLatex.y:165.1-12: warning: POSIX Yacc does not support %token-table [-Wyacc] 165 | %token-table | ^~~~~~~~~~~~ ../../../../../R/src/library/tools/src/gramLatex.y:179.1-11: warning: POSIX Yacc does not support %destructor [-Wyacc] 179 | %destructor { RELEASE_SV($$); } MACRO TEXT COMMENT BEGIN END | ^~~~~~~~~~~ making gramRd.d from ../../../../../R/src/library/tools/src/gramRd.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/gramRd.c -o gramRd.o /bin/sh ../../../../../R/tools/move-if-change y.tab.c ../../../../../R/src/library/tools/src/gramLatex.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tools/src/gramLatex.c -o gramLatex.o making gramLatex.d from ../../../../../R/src/library/tools/src/gramLatex.c gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o Rsha256.o sha256.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir ../../../../library/tools/libs installing 'sysdata.rda' config.status: creating src/library/compiler/Makefile config.status: creating src/library/compiler/DESCRIPTION building package 'compiler' mkdir ../../../library/compiler mkdir ../../../library/compiler/R byte-compiling package 'compiler' byte-compiling package 'base' byte-compiling package 'tools' config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/DESCRIPTION building package 'utils' mkdir ../../../library/utils mkdir ../../../library/utils/doc mkdir ../../../library/utils/R mkdir ../../../library/utils/Sweave mkdir ../../../library/utils/misc config.status: creating src/library/utils/src/Makefile making init.d from ../../../../../R/src/library/utils/src/init.c making io.d from ../../../../../R/src/library/utils/src/io.c making size.d from ../../../../../R/src/library/utils/src/size.c making sock.d from ../../../../../R/src/library/utils/src/sock.c making stubs.d from ../../../../../R/src/library/utils/src/stubs.c making utils.d from ../../../../../R/src/library/utils/src/utils.c making hashtab.d from ../../../../../R/src/library/utils/src/hashtab.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/utils/src/init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/utils/src/io.c -o io.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/utils/src/size.c -o size.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/utils/src/sock.c -o sock.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/utils/src/stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/utils/src/utils.c -o utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/utils/src/hashtab.c -o hashtab.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o utils.so init.o io.o size.o sock.o stubs.o utils.o hashtab.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir ../../../../library/utils/libs installing 'sysdata.rda' byte-compiling package 'utils' config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/DESCRIPTION building package 'grDevices' mkdir ../../../library/grDevices mkdir ../../../library/grDevices/R mkdir ../../../library/grDevices/afm mkdir ../../../library/grDevices/enc mkdir ../../../library/grDevices/fonts mkdir ../../../library/grDevices/fonts/Roboto mkdir ../../../library/grDevices/fonts/Montserrat mkdir ../../../library/grDevices/fonts/Montserrat/static mkdir ../../../library/grDevices/icc config.status: creating src/library/grDevices/src/Makefile making axis_scales.d from ../../../../../R/src/library/grDevices/src/axis_scales.c making chull.d from ../../../../../R/src/library/grDevices/src/chull.c making devices.d from ../../../../../R/src/library/grDevices/src/devices.c making init.d from ../../../../../R/src/library/grDevices/src/init.c making stubs.d from ../../../../../R/src/library/grDevices/src/stubs.c making colors.d from ../../../../../R/src/library/grDevices/src/colors.c making clippath.d from ../../../../../R/src/library/grDevices/src/clippath.c making patterns.d from ../../../../../R/src/library/grDevices/src/patterns.c making mask.d from ../../../../../R/src/library/grDevices/src/mask.c making group.d from ../../../../../R/src/library/grDevices/src/group.c making devCairo.d from ../../../../../R/src/library/grDevices/src/devCairo.c making devPicTeX.d from ../../../../../R/src/library/grDevices/src/devPicTeX.c making devPS.d from ../../../../../R/src/library/grDevices/src/devPS.c making devQuartz.d from ../../../../../R/src/library/grDevices/src/devQuartz.c making qdBitmap.d from ../../../../../R/src/library/grDevices/src/qdBitmap.c making qdPDF.d from ../../../../../R/src/library/grDevices/src/qdPDF.c making qdCocoa.d from ../../../../../R/src/library/grDevices/src/qdCocoa.m gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/axis_scales.c -o axis_scales.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/chull.c -o chull.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/devices.c -o devices.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/colors.c -o colors.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/patterns.c -o patterns.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/group.c -o group.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/devCairo.c -o devCairo.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/devPicTeX.c -o devPicTeX.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/devPS.c -o devPS.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/devQuartz.c -o devQuartz.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/qdBitmap.c -o qdBitmap.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c ../../../../../R/src/library/grDevices/src/qdPDF.c -o qdPDF.o ../../../../../R/src/library/grDevices/src/devQuartz.c:2057:5: warning: 'CGContextShowGlyphsWithAdvances' is deprecated: first deprecated in macOS 10.9 - No longer supported [-Wdeprecated-declarations] CGContextShowGlyphsWithAdvances(ctx,glyphs, g_adv, len); ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/CoreGraphics.framework/Headers/CGContext.h:1070:16: note: 'CGContextShowGlyphsWithAdvances' has been explicitly marked deprecated here CG_EXTERN void CGContextShowGlyphsWithAdvances(CGContextRef cg_nullable c, ^ ../../../../../R/src/library/grDevices/src/qdBitmap.c:66:39: warning: 'CFURLCreateStringByAddingPercentEscapes' is deprecated: first deprecated in macOS 10.11 - Use [NSString stringByAddingPercentEncodingWithAllowedCharacters:] instead, which always uses the recommended UTF-8 encoding, and which encodes for a specific URL component or subcomponent (since each URL component or subcomponent has different rules for what characters are valid). [-Wdeprecated-declarations] CFStringRef pathEscaped = CFURLCreateStringByAddingPercentEscapes(kCFAllocatorDefault, pathString, NULL, NULL, kCFStringEncodingUTF8); ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/CoreFoundation.framework/Headers/CFURL.h:408:13: note: 'CFURLCreateStringByAddingPercentEscapes' has been explicitly marked deprecated here CFStringRef CFURLCreateStringByAddingPercentEscapes(CFAllocatorRef allocator, CFStringRef originalString, CFStringRef charactersToLeaveUnescaped, CFStringRef legalURLCharactersToBeEscaped, CFStringEncoding encoding) API_DEPRECATED("Use [NSString stringByAddingPercentEncodingWithAllowedCharacters:] instead, which always uses the recommended UTF-8 encoding, and which encodes for a specific URL component or subcomponent (since each URL component or subcomponent has different rules for what characters are valid).", macos(10.0,10.11), ios(2.0,9.0), watchos(2.0,2.0), tvos(9.0,9.0)); ^ 1 warning generated. gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -fobjc-exceptions -c ../../../../../R/src/library/grDevices/src/qdCocoa.m -o qdCocoa.o 1 warning generated. ../../../../../R/src/library/grDevices/src/qdCocoa.m:94:22: warning: 'NSTitledWindowMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] styleMask: NSTitledWindowMask|NSClosableWindowMask| ^~~~~~~~~~~~~~~~~~ NSWindowStyleMaskTitled /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:972:32: note: 'NSTitledWindowMask' has been explicitly marked deprecated here static const NSWindowStyleMask NSTitledWindowMask API_DEPRECATED_WITH_REPLACEMENT("NSWindowStyleMaskTitled", macos(10.0,10.12)) = NSWindowStyleMaskTitled; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:94:41: warning: 'NSClosableWindowMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] styleMask: NSTitledWindowMask|NSClosableWindowMask| ^~~~~~~~~~~~~~~~~~~~ NSWindowStyleMaskClosable /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:973:32: note: 'NSClosableWindowMask' has been explicitly marked deprecated here static const NSWindowStyleMask NSClosableWindowMask API_DEPRECATED_WITH_REPLACEMENT("NSWindowStyleMaskClosable", macos(10.0,10.12)) = NSWindowStyleMaskClosable; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:95:8: warning: 'NSMiniaturizableWindowMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] NSMiniaturizableWindowMask|NSResizableWindowMask//|NSTexturedBackgroundWindowMask ^~~~~~~~~~~~~~~~~~~~~~~~~~ NSWindowStyleMaskMiniaturizable /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:974:32: note: 'NSMiniaturizableWindowMask' has been explicitly marked deprecated here static const NSWindowStyleMask NSMiniaturizableWindowMask API_DEPRECATED_WITH_REPLACEMENT("NSWindowStyleMaskMiniaturizable", macos(10.0,10.12)) = NSWindowStyleMaskMiniaturizable; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:95:35: warning: 'NSResizableWindowMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] NSMiniaturizableWindowMask|NSResizableWindowMask//|NSTexturedBackgroundWindowMask ^~~~~~~~~~~~~~~~~~~~~ NSWindowStyleMaskResizable /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:975:32: note: 'NSResizableWindowMask' has been explicitly marked deprecated here static const NSWindowStyleMask NSResizableWindowMask API_DEPRECATED_WITH_REPLACEMENT("NSWindowStyleMaskResizable", macos(10.0,10.12)) = NSWindowStyleMaskResizable; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:102:23: warning: sending 'QuartzCocoaView *' to parameter of incompatible type 'id _Nullable' [window setDelegate: view]; ^~~~ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:339:49: note: passing argument to parameter 'delegate' here @property (nullable, weak) id delegate; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:269:6: warning: 'setRequiredFileType:' is deprecated: first deprecated in macOS 10.6 - Use -setAllowedFileTypes: instead [-Wdeprecated-declarations] [sp setRequiredFileType:@"pdf"]; ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSSavePanel.h:206:1: note: 'setRequiredFileType:' has been explicitly marked deprecated here - (void)setRequiredFileType:(nullable NSString *)type API_DEPRECATED("Use -setAllowedFileTypes: instead", macos(10.0,10.6)); ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:271:19: warning: 'runModalForDirectory:file:' is deprecated: first deprecated in macOS 10.6 - Use -runModal instead. The following parameters are replaced by properties: 'path' is replaced by 'directoryURL' and 'name' by 'nameFieldStringValue'. [-Wdeprecated-declarations] int answer = [sp runModalForDirectory:nil file:@"Rplot.pdf"]; ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSSavePanel.h:208:1: note: 'runModalForDirectory:file:' has been explicitly marked deprecated here - (NSInteger)runModalForDirectory:(nullable NSString *)path file:(nullable NSString *)name API_DEPRECATED("Use -runModal instead. The following parameters are replaced by properties: 'path' is replaced by 'directoryURL' and 'name' by 'nameFieldStringValue'.", macos(10.0,10.6)); ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:272:15: warning: 'NSOKButton' is deprecated: first deprecated in macOS 10.10 [-Wdeprecated-declarations] if(answer == NSOKButton) ^~~~~~~~~~ NSModalResponseOK /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSPanel.h:51:5: note: 'NSOKButton' has been explicitly marked deprecated here NSOKButton API_DEPRECATED_WITH_REPLACEMENT("NSModalResponseOK", macos(10.0,10.10)) = NSModalResponseOK, ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:273:29: warning: 'filename' is deprecated: first deprecated in macOS 10.6 - Use -URL instead [-Wdeprecated-declarations] if (![self writeAsPDF:[sp filename]]) NSBeep(); ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSSavePanel.h:202:1: note: 'filename' has been explicitly marked deprecated here - (NSString *)filename API_DEPRECATED("Use -URL instead", macos(10.0,10.6)); ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:307:50: warning: 'NSPDFPboardType' is deprecated: first deprecated in macOS 10.14 [-Wdeprecated-declarations] [pb declareTypes: [NSArray arrayWithObjects: NSPDFPboardType, nil ] owner:nil]; ^~~~~~~~~~~~~~~ NSPasteboardTypePDF /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSPasteboard.h:322:32: note: 'NSPDFPboardType' has been explicitly marked deprecated here APPKIT_EXTERN NSPasteboardType NSPDFPboardType API_DEPRECATED_WITH_REPLACEMENT("NSPasteboardTypePDF", macos(10.0,10.14)); ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:308:48: warning: 'NSPDFPboardType' is deprecated: first deprecated in macOS 10.14 [-Wdeprecated-declarations] [pb setData: (NSMutableData*) data forType:NSPDFPboardType]; ^~~~~~~~~~~~~~~ NSPasteboardTypePDF /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSPasteboard.h:322:32: note: 'NSPDFPboardType' has been explicitly marked deprecated here APPKIT_EXTERN NSPasteboardType NSPDFPboardType API_DEPRECATED_WITH_REPLACEMENT("NSPasteboardTypePDF", macos(10.0,10.14)); ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:318:41: warning: 'NSFitPagination' is deprecated: first deprecated in macOS 11.0 [-Wdeprecated-declarations] [printInfo setHorizontalPagination: NSFitPagination]; ^~~~~~~~~~~~~~~ NSPrintingPaginationModeFit /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSPrintInfo.h:207:39: note: 'NSFitPagination' has been explicitly marked deprecated here static const NSPrintingPaginationMode NSFitPagination API_DEPRECATED_WITH_REPLACEMENT("NSPrintingPaginationModeFit", macos(10.0, 11.0)) = NSPrintingPaginationModeFit; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:319:39: warning: 'NSAutoPagination' is deprecated: first deprecated in macOS 11.0 [-Wdeprecated-declarations] [printInfo setVerticalPagination: NSAutoPagination]; ^~~~~~~~~~~~~~~~ NSPrintingPaginationModeAutomatic /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSPrintInfo.h:206:39: note: 'NSAutoPagination' has been explicitly marked deprecated here static const NSPrintingPaginationMode NSAutoPagination API_DEPRECATED_WITH_REPLACEMENT("NSPrintingPaginationModeAutomatic", macos(10.0, 11.0)) = NSPrintingPaginationModeAutomatic; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:355:60: warning: 'graphicsPort' is deprecated: first deprecated in macOS 10.14 [-Wdeprecated-declarations] CGContextRef ctx = [[NSGraphicsContext currentContext] graphicsPort]; ^~~~~~~~~~~~ CGContext /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSGraphicsContext.h:110:28: note: property 'graphicsPort' is declared deprecated here @property (readonly) void *graphicsPort NS_RETURNS_INNER_POINTER API_DEPRECATED_WITH_REPLACEMENT("CGContext", macos(10.0,10.14)); ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSGraphicsContext.h:110:28: note: 'graphicsPort' has been explicitly marked deprecated here ../../../../../R/src/library/grDevices/src/qdCocoa.m:443:17: warning: 'NSControlKeyMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] if (mf&(NSControlKeyMask|NSRightMouseDownMask|NSOtherMouseDownMask)) ^~~~~~~~~~~~~~~~ NSEventModifierFlagControl /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:179:35: note: 'NSControlKeyMask' has been explicitly marked deprecated here static const NSEventModifierFlags NSControlKeyMask API_DEPRECATED_WITH_REPLACEMENT("NSEventModifierFlagControl", macos(10.0,10.12)) = NSEventModifierFlagControl; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:443:34: warning: 'NSRightMouseDownMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] if (mf&(NSControlKeyMask|NSRightMouseDownMask|NSOtherMouseDownMask)) ^~~~~~~~~~~~~~~~~~~~ NSEventMaskRightMouseDown /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:137:26: note: 'NSRightMouseDownMask' has been explicitly marked deprecated here static const NSEventMask NSRightMouseDownMask API_DEPRECATED_WITH_REPLACEMENT("NSEventMaskRightMouseDown", macos(10.0,10.12)) = NSEventMaskRightMouseDown; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:443:55: warning: 'NSOtherMouseDownMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] if (mf&(NSControlKeyMask|NSRightMouseDownMask|NSOtherMouseDownMask)) ^~~~~~~~~~~~~~~~~~~~ NSEventMaskOtherMouseDown /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:155:26: note: 'NSOtherMouseDownMask' has been explicitly marked deprecated here static const NSEventMask NSOtherMouseDownMask API_DEPRECATED_WITH_REPLACEMENT("NSEventMaskOtherMouseDown", macos(10.0,10.12)) = NSEventMaskOtherMouseDown; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:597:54: warning: 'NSAnyEventMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] while ((event = [NSApp nextEventMatchingMask:NSAnyEventMask ^~~~~~~~~~~~~~ NSEventMaskAny /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:158:26: note: 'NSAnyEventMask' has been explicitly marked deprecated here static const NSEventMask NSAnyEventMask API_DEPRECATED_WITH_REPLACEMENT("NSEventMaskAny", macos(10.0,10.12)) = NSUIntegerMax; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:663:13: warning: 'GetFrontProcess' is deprecated: first deprecated in macOS 10.9 [-Wdeprecated-declarations] if (GetFrontProcess(&frProc) == noErr) { ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:434:1: note: 'GetFrontProcess' has been explicitly marked deprecated here GetFrontProcess(ProcessSerialNumber * PSN) AVAILABLE_MAC_OS_X_VERSION_10_0_AND_LATER_BUT_DEPRECATED_IN_MAC_OS_X_VERSION_10_9; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:664:17: warning: 'GetCurrentProcess' is deprecated: first deprecated in macOS 10.9 [-Wdeprecated-declarations] if (GetCurrentProcess(&myProc) == noErr) { ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:415:1: note: 'GetCurrentProcess' has been explicitly marked deprecated here MacGetCurrentProcess(ProcessSerialNumber * PSN) AVAILABLE_MAC_OS_X_VERSION_10_0_AND_LATER_BUT_DEPRECATED_IN_MAC_OS_X_VERSION_10_9; ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:412:34: note: expanded from macro 'MacGetCurrentProcess' #define MacGetCurrentProcess GetCurrentProcess ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:665:21: warning: 'SameProcess' is deprecated: first deprecated in macOS 10.9 [-Wdeprecated-declarations] if (SameProcess(&frProc, &myProc, &sameProc) == noErr && !sameProc) { ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:696:1: note: 'SameProcess' has been explicitly marked deprecated here SameProcess( ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:668:17: warning: 'SetFrontProcess' is deprecated: first deprecated in macOS 10.9 [-Wdeprecated-declarations] SetFrontProcess(&myProc); ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:603:1: note: 'SetFrontProcess' has been explicitly marked deprecated here SetFrontProcess(const ProcessSerialNumber * PSN) AVAILABLE_MAC_OS_X_VERSION_10_0_AND_LATER_BUT_DEPRECATED_IN_MAC_OS_X_VERSION_10_9; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:782:55: warning: 'NSAnyEventMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] NSEvent *event = [NSApp nextEventMatchingMask:NSAnyEventMask ^~~~~~~~~~~~~~ NSEventMaskAny /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:158:26: note: 'NSAnyEventMask' has been explicitly marked deprecated here static const NSEventMask NSAnyEventMask API_DEPRECATED_WITH_REPLACEMENT("NSEventMaskAny", macos(10.0,10.12)) = NSUIntegerMax; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:858:24: warning: 'canDraw' is deprecated: first deprecated in macOS 10.14 - If a view needs display, -drawRect: or -updateLayer will be called automatically when the view is able to draw. To check whether a view is in a window, call -window. To check whether a view is hidden, call -isHiddenOrHasHiddenAncestor. [-Wdeprecated-declarations] if (![ci->view canDraw]) ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSView.h:185:27: note: property 'canDraw' is declared deprecated here @property (readonly) BOOL canDraw API_DEPRECATED("If a view needs display, -drawRect: or -updateLayer will be called automatically when the view is able to draw. To check whether a view is in a window, call -window. To check whether a view is hidden, call -isHiddenOrHasHiddenAncestor.", macos(10.0,10.14)); ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSView.h:185:27: note: 'canDraw' has been explicitly marked deprecated here ../../../../../R/src/library/grDevices/src/qdCocoa.m:861:19: warning: 'lockFocus' is deprecated: first deprecated in macOS 10.14 - To draw, subclass NSView and implement -drawRect:; AppKit's automatic deferred display mechanism will call -drawRect: as necessary to display the view. [-Wdeprecated-declarations] [ci->view lockFocus]; ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSView.h:188:1: note: 'lockFocus' has been explicitly marked deprecated here - (void)lockFocus API_DEPRECATED("To draw, subclass NSView and implement -drawRect:; AppKit's automatic deferred display mechanism will call -drawRect: as necessary to display the view.", macos(10.0,10.14)); ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:863:37: warning: 'initWithFocusedViewRect:' is deprecated: first deprecated in macOS 10.14 - Use -[NSView cacheDisplayInRect:toBitmapImageRep:] to snapshot a view. [-Wdeprecated-declarations] initWithFocusedViewRect: ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSBitmapImageRep.h:81:1: note: 'initWithFocusedViewRect:' has been explicitly marked deprecated here - (nullable instancetype)initWithFocusedViewRect:(NSRect)rect API_DEPRECATED("Use -[NSView cacheDisplayInRect:toBitmapImageRep:] to snapshot a view.", macos(10.0,10.14)); ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:872:58: warning: 'NSFloatingPointSamplesBitmapFormat' is deprecated: first deprecated in macOS 10.14 [-Wdeprecated-declarations] if ([rep isPlanar] || [rep bitsPerSample] != 8 || (bf & NSFloatingPointSamplesBitmapFormat) || (bpp != 24 && bpp != 32)) { ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NSBitmapFormatFloatingPointSamples /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSBitmapImageRep.h:164:29: note: 'NSFloatingPointSamplesBitmapFormat' has been explicitly marked deprecated here static const NSBitmapFormat NSFloatingPointSamplesBitmapFormat API_DEPRECATED_WITH_REPLACEMENT("NSBitmapFormatFloatingPointSamples", macos(10.0,10.14)) = NSBitmapFormatFloatingPointSamples; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:887:11: warning: 'NSAlphaFirstBitmapFormat' is deprecated: first deprecated in macOS 10.14 [-Wdeprecated-declarations] if (bf & NSAlphaFirstBitmapFormat) /* ARGB */ ^~~~~~~~~~~~~~~~~~~~~~~~ NSBitmapFormatAlphaFirst /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSBitmapImageRep.h:162:29: note: 'NSAlphaFirstBitmapFormat' has been explicitly marked deprecated here static const NSBitmapFormat NSAlphaFirstBitmapFormat API_DEPRECATED_WITH_REPLACEMENT("NSBitmapFormatAlphaFirst", macos(10.5,10.14)) = NSBitmapFormatAlphaFirst; ^ ../../../../../R/src/library/grDevices/src/qdCocoa.m:906:19: warning: 'unlockFocus' is deprecated: first deprecated in macOS 10.14 - To draw, subclass NSView and implement -drawRect:; AppKit's automatic deferred display mechanism will call -drawRect: as necessary to display the view. [-Wdeprecated-declarations] [ci->view unlockFocus]; ^ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSView.h:189:1: note: 'unlockFocus' has been explicitly marked deprecated here - (void)unlockFocus API_DEPRECATED("To draw, subclass NSView and implement -drawRect:; AppKit's automatic deferred display mechanism will call -drawRect: as necessary to display the view.", macos(10.0,10.14)); ^ 29 warnings generated. gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o group.o devCairo.o devPicTeX.o devPS.o devQuartz.o qdBitmap.o qdPDF.o qdCocoa.o -framework AppKit -lz -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir ../../../../library/grDevices/libs config.status: creating src/library/grDevices/src/cairo/Makefile making cairoBM.d from ../../../../../../R/src/library/grDevices/src/cairo/cairoBM.c gcc -I. -I../../../../../src/include -I../../../../../../R/src/include -DFRIBIDI_LIB_STATIC -DPCRE2_STATIC -I/opt/R/x86_64/include/pango-1.0 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/fribidi -I/opt/R/x86_64/include/cairo -I/opt/R/x86_64/include -I/opt/R/x86_64/include/pixman-1 -I/opt/R/x86_64/include -I/opt/R/x86_64/include/freetype2 -I/opt/R/x86_64/include/harfbuzz -I/opt/R/x86_64/include/glib-2.0 -I/opt/R/x86_64/lib/glib-2.0/include -I/opt/R/x86_64/include -I/opt/R/x86_64/include/libpng16 -I../../../../../../R/src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ../../../../../../R/src/library/grDevices/src/cairo/cairoBM.c -o cairoBM.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -L/opt/R/x86_64/lib -ltiff -lwebp -lzstd -llzma -ljpeg -lz -lwebp -lm -D_THREAD_SAFE -pthread -lsharpyuv -lm -D_THREAD_SAFE -pthread -lzstd -pthread -llzma -pthread -lpthread -ljpeg -lz -L/opt/R/x86_64/lib -ljpeg -L/opt/R/x86_64/lib -lpng16 -lz -L/opt/R/x86_64/lib -L/opt/X11/lib -L/opt/R/x86_64/lib -lpangocairo-1.0 -lm -framework CoreFoundation -framework ApplicationServices -lpangoft2-1.0 -lm -framework CoreFoundation -framework ApplicationServices -lpango-1.0 -lm -framework CoreFoundation -framework ApplicationServices -lgio-2.0 -lintl -framework Foundation -framework CoreFoundation -framework AppKit -lresolv -lgmodule-2.0 -lintl -lfribidi -lz -lcairo -lz -lXrender -lSM -lICE -lX11 -lXext -lgobject-2.0 -lintl -lffi -lpixman-1 -lfontconfig -lexpat -lfreetype -lbz2 -lharfbuzz -lm -lglib-2.0 -lintl -lm -framework Foundation -framework CoreFoundation -framework AppKit -framework Carbon -lpcre2-8 -lpng16 -lz -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups byte-compiling package 'grDevices' config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/DESCRIPTION building package 'graphics' mkdir ../../../library/graphics mkdir ../../../library/graphics/R config.status: creating src/library/graphics/src/Makefile making init.d from ../../../../../R/src/library/graphics/src/init.c making base.d from ../../../../../R/src/library/graphics/src/base.c making graphics.d from ../../../../../R/src/library/graphics/src/graphics.c making par.d from ../../../../../R/src/library/graphics/src/par.c making plot.d from ../../../../../R/src/library/graphics/src/plot.c making plot3d.d from ../../../../../R/src/library/graphics/src/plot3d.c making stem.d from ../../../../../R/src/library/graphics/src/stem.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/graphics/src/init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/graphics/src/base.c -o base.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/graphics/src/graphics.c -o graphics.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/graphics/src/par.c -o par.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/graphics/src/plot.c -o plot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/graphics/src/plot3d.c -o plot3d.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I../../../../../R/src/main -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/graphics/src/stem.c -o stem.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir ../../../../library/graphics/libs byte-compiling package 'graphics' config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/DESCRIPTION building package 'stats' mkdir ../../../library/stats mkdir ../../../library/stats/R config.status: creating src/library/stats/src/Makefile making init.d from ../../../../../R/src/library/stats/src/init.c making kmeans.d from ../../../../../R/src/library/stats/src/kmeans.c making ansari.d from ../../../../../R/src/library/stats/src/ansari.c making bandwidths.d from ../../../../../R/src/library/stats/src/bandwidths.c making chisqsim.d from ../../../../../R/src/library/stats/src/chisqsim.c making d2x2xk.d from ../../../../../R/src/library/stats/src/d2x2xk.c making kendall.d from ../../../../../R/src/library/stats/src/kendall.c making fexact.d from ../../../../../R/src/library/stats/src/fexact.c making ks.d from ../../../../../R/src/library/stats/src/ks.c making line.d from ../../../../../R/src/library/stats/src/line.c making smooth.d from ../../../../../R/src/library/stats/src/smooth.c making prho.d from ../../../../../R/src/library/stats/src/prho.c making swilk.d from ../../../../../R/src/library/stats/src/swilk.c making ksmooth.d from ../../../../../R/src/library/stats/src/ksmooth.c making loessc.d from ../../../../../R/src/library/stats/src/loessc.c making monoSpl.d from ../../../../../R/src/library/stats/src/monoSpl.c making isoreg.d from ../../../../../R/src/library/stats/src/isoreg.c making Srunmed.d from ../../../../../R/src/library/stats/src/Srunmed.c making dblcen.d from ../../../../../R/src/library/stats/src/dblcen.c making distance.d from ../../../../../R/src/library/stats/src/distance.c making hclust-utils.d from ../../../../../R/src/library/stats/src/hclust-utils.c making nls.d from ../../../../../R/src/library/stats/src/nls.c making rWishart.d from ../../../../../R/src/library/stats/src/rWishart.c making HoltWinters.d from ../../../../../R/src/library/stats/src/HoltWinters.c making PPsum.d from ../../../../../R/src/library/stats/src/PPsum.c making arima.d from ../../../../../R/src/library/stats/src/arima.c making burg.d from ../../../../../R/src/library/stats/src/burg.c making filter.d from ../../../../../R/src/library/stats/src/filter.c making mAR.d from ../../../../../R/src/library/stats/src/mAR.c making pacf.d from ../../../../../R/src/library/stats/src/pacf.c making starma.d from ../../../../../R/src/library/stats/src/starma.c making port.d from ../../../../../R/src/library/stats/src/port.c making family.d from ../../../../../R/src/library/stats/src/family.c making sbart.d from ../../../../../R/src/library/stats/src/sbart.c making approx.d from ../../../../../R/src/library/stats/src/approx.c making loglin.d from ../../../../../R/src/library/stats/src/loglin.c making lowess.d from ../../../../../R/src/library/stats/src/lowess.c making massdist.d from ../../../../../R/src/library/stats/src/massdist.c making splines.d from ../../../../../R/src/library/stats/src/splines.c making lm.d from ../../../../../R/src/library/stats/src/lm.c making complete_cases.d from ../../../../../R/src/library/stats/src/complete_cases.c making cov.d from ../../../../../R/src/library/stats/src/cov.c making deriv.d from ../../../../../R/src/library/stats/src/deriv.c making fft.d from ../../../../../R/src/library/stats/src/fft.c making fourier.d from ../../../../../R/src/library/stats/src/fourier.c making model.d from ../../../../../R/src/library/stats/src/model.c making optim.d from ../../../../../R/src/library/stats/src/optim.c making optimize.d from ../../../../../R/src/library/stats/src/optimize.c making integrate.d from ../../../../../R/src/library/stats/src/integrate.c making random.d from ../../../../../R/src/library/stats/src/random.c making distn.d from ../../../../../R/src/library/stats/src/distn.c making zeroin.d from ../../../../../R/src/library/stats/src/zeroin.c making rcont.d from ../../../../../R/src/library/stats/src/rcont.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/init.c -o init.o making influence.d from ../../../../../R/src/library/stats/src/influence.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/kmeans.c -o kmeans.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/ansari.c -o ansari.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/bandwidths.c -o bandwidths.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/chisqsim.c -o chisqsim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/d2x2xk.c -o d2x2xk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/fexact.c -o fexact.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/kendall.c -o kendall.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/ks.c -o ks.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/line.c -o line.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/smooth.c -o smooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/prho.c -o prho.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/swilk.c -o swilk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/ksmooth.c -o ksmooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/loessc.c -o loessc.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/monoSpl.c -o monoSpl.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/isoreg.c -o isoreg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/Srunmed.c -o Srunmed.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/dblcen.c -o dblcen.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/distance.c -o distance.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/hclust-utils.c -o hclust-utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/nls.c -o nls.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/rWishart.c -o rWishart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/HoltWinters.c -o HoltWinters.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/PPsum.c -o PPsum.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/arima.c -o arima.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/burg.c -o burg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/filter.c -o filter.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/mAR.c -o mAR.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/pacf.c -o pacf.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/starma.c -o starma.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/port.c -o port.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/family.c -o family.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/sbart.c -o sbart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/approx.c -o approx.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/loglin.c -o loglin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/lowess.c -o lowess.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/massdist.c -o massdist.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/splines.c -o splines.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/lm.c -o lm.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/complete_cases.c -o complete_cases.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/cov.c -o cov.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/deriv.c -o deriv.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/fft.c -o fft.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/fourier.c -o fourier.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/model.c -o model.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/optim.c -o optim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/optimize.c -o optimize.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/integrate.c -o integrate.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/random.c -o random.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/distn.c -o distn.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/zeroin.c -o zeroin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/rcont.c -o rcont.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/influence.c -o influence.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/bsplvd.f -o bsplvd.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/bvalue.f -o bvalue.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/bvalus.f -o bvalus.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/loessf.f -o loessf.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/ppr.f -o ppr.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/qsbart.f -o qsbart.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/sgram.f -o sgram.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/sinerp.f -o sinerp.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/sslvrg.f -o sslvrg.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/stxwx.f -o stxwx.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/hclust.f -o hclust.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/kmns.f -o kmns.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/eureka.f -o eureka.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/stl.f -o stl.o gfortran -fPIC -g -O2 -msse2 -mfpmath=sse -c ../../../../../R/src/library/stats/src/portsrc.f -o portsrc.o gfortran -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/stats/src/lminfl.f -o lminfl.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -L../../../../lib -lRlapack -L../../../../lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups ld: warning: could not create compact unwind for _ehg136_: stack subq instruction is too different from dwarf stack sizeld: warning: could not create compact unwind for _splineaa_: stack subq instruction is too different from dwarf stack size ld: warning: could not create compact unwind for _ehg139_: stack subq instruction is too different from dwarf stack size mkdir ../../../../library/stats/libs byte-compiling package 'stats' config.status: creating src/library/datasets/Makefile config.status: creating src/library/datasets/DESCRIPTION building package 'datasets' mkdir ../../../library/datasets mkdir ../../../library/datasets/data config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/DESCRIPTION building package 'methods' mkdir ../../../library/methods mkdir ../../../library/methods/R config.status: creating src/library/methods/src/Makefile making do_substitute_direct.d from ../../../../../R/src/library/methods/src/do_substitute_direct.c making init.d from ../../../../../R/src/library/methods/src/init.c making methods_list_dispatch.d from ../../../../../R/src/library/methods/src/methods_list_dispatch.c making slot.d from ../../../../../R/src/library/methods/src/slot.c making tests.d from ../../../../../R/src/library/methods/src/tests.c making class_support.d from ../../../../../R/src/library/methods/src/class_support.c making utils.d from ../../../../../R/src/library/methods/src/utils.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/methods/src/do_substitute_direct.c -o do_substitute_direct.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/methods/src/init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/methods/src/methods_list_dispatch.c -o methods_list_dispatch.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/methods/src/slot.c -o slot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/methods/src/class_support.c -o class_support.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/methods/src/tests.c -o tests.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/methods/src/utils.c -o utils.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir ../../../../library/methods/libs byte-compiling package 'methods' initializing class and method definitions ... done config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/DESCRIPTION building package 'grid' mkdir ../../../library/grid mkdir ../../../library/grid/doc mkdir ../../../library/grid/R config.status: creating src/library/grid/src/Makefile making clippath.d from ../../../../../R/src/library/grid/src/clippath.c making gpar.d from ../../../../../R/src/library/grid/src/gpar.c making grid.d from ../../../../../R/src/library/grid/src/grid.c making just.d from ../../../../../R/src/library/grid/src/just.c making layout.d from ../../../../../R/src/library/grid/src/layout.c making mask.d from ../../../../../R/src/library/grid/src/mask.c making matrix.d from ../../../../../R/src/library/grid/src/matrix.c making path.d from ../../../../../R/src/library/grid/src/path.c making register.d from ../../../../../R/src/library/grid/src/register.c making state.d from ../../../../../R/src/library/grid/src/state.c making typeset.d from ../../../../../R/src/library/grid/src/typeset.c making unit.d from ../../../../../R/src/library/grid/src/unit.c making util.d from ../../../../../R/src/library/grid/src/util.c making viewport.d from ../../../../../R/src/library/grid/src/viewport.c gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/gpar.c -o gpar.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/grid.c -o grid.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/just.c -o just.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/layout.c -o layout.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/matrix.c -o matrix.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/path.c -o path.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/register.c -o register.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/state.c -o state.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/typeset.c -o typeset.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/unit.c -o unit.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/util.c -o util.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/grid/src/viewport.c -o viewport.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o path.o register.o state.o typeset.o unit.o util.o viewport.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir ../../../../library/grid/libs byte-compiling package 'grid' config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/DESCRIPTION building package 'splines' mkdir ../../../library/splines mkdir ../../../library/splines/R config.status: creating src/library/splines/src/Makefile gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/splines/src/splines.c -o splines.o making splines.d from ../../../../../R/src/library/splines/src/splines.c gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o splines.so splines.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir ../../../../library/splines/libs byte-compiling package 'splines' config.status: creating src/library/stats4/Makefile config.status: creating src/library/stats4/DESCRIPTION building package 'stats4' mkdir ../../../library/stats4 mkdir ../../../library/stats4/R byte-compiling package 'stats4' config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/DESCRIPTION building package 'tcltk' mkdir ../../../library/tcltk mkdir ../../../library/tcltk/R mkdir ../../../library/tcltk/exec config.status: creating src/library/tcltk/src/Makefile making init.d from ../../../../../R/src/library/tcltk/src/init.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/opt/R/x86_64/include -I/opt/R/x86_64/include -I/usr/X11R6/include -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tcltk/src/init.c -o init.o making tcltk.d from ../../../../../R/src/library/tcltk/src/tcltk.c making tcltk_unix.d from ../../../../../R/src/library/tcltk/src/tcltk_unix.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/opt/R/x86_64/include -I/opt/R/x86_64/include -I/usr/X11R6/include -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tcltk/src/tcltk.c -o tcltk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/opt/R/x86_64/include -I/opt/R/x86_64/include -I/usr/X11R6/include -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/tcltk/src/tcltk_unix.c -o tcltk_unix.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o tcltk.so init.o tcltk.o tcltk_unix.o -L/opt/R/x86_64/lib -ltcl8.6 -L/opt/R/x86_64/lib -ltk8.6 -L/usr/X11R6/lib -lX11 -Wl,-weak-lXss -lXext -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir ../../../../library/tcltk/libs byte-compiling package 'tcltk' config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/DESCRIPTION building package 'parallel' mkdir ../../../library/parallel mkdir ../../../library/parallel/doc mkdir ../../../library/parallel/R config.status: creating src/library/parallel/src/Makefile gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/parallel/src/init.c -o init.o making init.d from ../../../../../R/src/library/parallel/src/init.c making rngstream.d from ../../../../../R/src/library/parallel/src/rngstream.c making fork.d from ../../../../../R/src/library/parallel/src/fork.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/parallel/src/rngstream.c -o rngstream.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../../R/src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c ../../../../../R/src/library/parallel/src/fork.c -o fork.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o parallel.so init.o rngstream.o fork.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups mkdir ../../../../library/parallel/libs byte-compiling package 'parallel' installing parsed NAMESPACE files config.status: creating tests/Makefile make[1]: Nothing to be done for `R'. you should 'make docs' now ... building/updating vignettes for package 'grid' ... configuring Java ... Java interpreter : /usr/bin/java processing 'displaylist.Rnw' Java version : 1.8.0_201 Java home path : /Library/Internet Plug-Ins/JavaAppletPlugin.plugin/Contents/Home Java compiler : /usr/bin/javac Java headers gen.: /usr/bin/javah Java archive tool: /usr/bin/jar trying to compile and link a JNI program detected JNI cpp flags : detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c conftest.c -o conftest.o conftest.c:1:10: fatal error: 'jni.h' file not found #include ^~~~~~~ 1 error generated. make[2]: *** [conftest.o] Error 1 Unable to compile a JNI program JAVA_HOME : /Library/Internet Plug-Ins/JavaAppletPlugin.plugin/Contents/Home Java library path: JNI cpp flags : JNI linker flags : Updating Java configuration in /Users/pd/r-devel/BUILD-dist Done. creating doc/NEWS creating doc/NEWS.pdf processing 'frame.Rnw' processing 'grid.Rnw' creating doc/manual/version.texi creating doc/manual/R-FAQ.html mkdir ../../doc/manual/images creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html processing 'grobs.Rnw' installing parsed Rd utils methods graphics stats datasets base processing 'interactive.Rnw' grDevices tcltk splines tools grid compiler stats4 parallel building/updating package metadata ... processing 'locndimn.Rnw' writing package indices processing 'moveline.Rnw' config.status: creating src/library/Recommended/Makefile begin installing recommended package MASS begin installing recommended package lattice begin installing recommended package codetools * installing *source* package 'codetools' ... ** package 'codetools' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (codetools) begin installing recommended package foreign processing 'nonfinite.Rnw' processing 'plotexample.Rnw' * installing *source* package 'foreign' ... ** package 'foreign' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c R_systat.c -o R_systat.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c Rdbfread.c -o Rdbfread.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c Rdbfwrite.c -o Rdbfwrite.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c SASxport.c -o SASxport.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c avl.c -o avl.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c dbfopen.c -o dbfopen.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c file-handle.c -o file-handle.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c format.c -o format.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c minitab.c -o minitab.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c pfm-read.c -o pfm-read.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c sfm-read.c -o sfm-read.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c spss.c -o spss.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c stataread.c -o stataread.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (foreign) begin installing recommended package KernSmooth processing 'rotated.Rnw' * installing *source* package 'MASS' ... ** package 'MASS' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c MASS.c -o MASS.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c lqs.c -o lqs.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o MASS.so MASS.o lqs.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/MASS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (MASS) begin installing recommended package rpart * installing *source* package 'lattice' ... ** package 'lattice' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c threeDplot.c -o threeDplot.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o lattice.so init.o threeDplot.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/lattice/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (lattice) begin installing recommended package class processing 'saveload.Rnw' * installing *source* package 'KernSmooth' ... ** package 'KernSmooth' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using Fortran compiler: 'GNU Fortran (GCC) 12.2.0' using SDK: 'MacOSX13.1.sdk' gfortran -fPIC -g -O2 -c blkest.f -o blkest.o gfortran -fPIC -g -O2 -c cp.f -o cp.o gfortran -fPIC -g -O2 -c dgedi.f -o dgedi.o gfortran -fPIC -g -O2 -c dgefa.f -o dgefa.o gfortran -fPIC -g -O2 -c dgesl.f -o dgesl.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o gfortran -fPIC -g -O2 -c linbin.f -o linbin.o gfortran -fPIC -g -O2 -c linbin2D.f -o linbin2D.o gfortran -fPIC -g -O2 -c locpoly.f -o locpoly.o gfortran -fPIC -g -O2 -c rlbin.f -o rlbin.o gfortran -fPIC -g -O2 -c sdiag.f -o sdiag.o gfortran -fPIC -g -O2 -c sstdiag.f -o sstdiag.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -L/Users/pd/r-devel/BUILD-dist/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/KernSmooth/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (KernSmooth) begin installing recommended package nnet * installing *source* package 'class' ... ** package 'class' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c class.c -o class.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o class.so class.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/class/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (class) begin installing recommended package spatial processing 'sharing.Rnw' * installing *source* package 'nnet' ... ** package 'nnet' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c nnet.c -o nnet.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o nnet.so nnet.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nnet) begin installing recommended package Matrix * installing *source* package 'rpart' ... ** package 'rpart' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c anova.c -o anova.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c anovapred.c -o anovapred.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c branch.c -o branch.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c bsplit.c -o bsplit.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c choose_surg.c -o choose_surg.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c fix_cp.c -o fix_cp.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c free_tree.c -o free_tree.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c gini.c -o gini.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c graycode.c -o graycode.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c insert_split.c -o insert_split.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c make_cp_list.c -o make_cp_list.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c make_cp_table.c -o make_cp_table.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c mysort.c -o mysort.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c nodesplit.c -o nodesplit.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c partition.c -o partition.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c poisson.c -o poisson.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c pred_rpart.c -o pred_rpart.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c print_tree.c -o print_tree.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c rpart.c -o rpart.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c rpart_callback.c -o rpart_callback.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c rpartexp.c -o rpartexp.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c rpartexp2.c -o rpartexp2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c rpcountup.c -o rpcountup.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c rpmatrix.c -o rpmatrix.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c rundown.c -o rundown.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c rundown2.c -o rundown2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c surrogate.c -o surrogate.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c usersplit.c -o usersplit.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c xpred.c -o xpred.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c xval.c -o xval.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/rpart/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (rpart) begin installing recommended package nlme * installing *source* package 'spatial' ... ** package 'spatial' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c krc.c -o krc.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c pps.c -o pps.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o spatial.so init.o krc.o pps.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/spatial/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (spatial) begin installing recommended package cluster processing 'viewports.Rnw' * installing *source* package 'cluster' ... ** package 'cluster' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using Fortran compiler: 'GNU Fortran (GCC) 12.2.0' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c clara.c -o clara.o gfortran -fPIC -g -O2 -c daisy.f -o daisy.o gfortran -fPIC -g -O2 -c dysta.f -o dysta.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c fanny.c -o fanny.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c mona.c -o mona.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c pam.c -o pam.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c sildist.c -o sildist.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c spannel.c -o spannel.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c twins.c -o twins.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/cluster/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (cluster) building/updating vignettes for package 'parallel' ... processing 'parallel.Rnw' building/updating vignettes for package 'utils' ... processing 'Sweave.Rnw' * installing *source* package 'nlme' ... ** package 'nlme' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using Fortran compiler: 'GNU Fortran (GCC) 12.2.0' using SDK: 'MacOSX13.1.sdk' gfortran -fPIC -g -O2 -c chol.f -o chol.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c corStruct.c -o corStruct.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c gnls.c -o gnls.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c init.c -o init.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c matrix.c -o matrix.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c nlOptimizer.c -o nlOptimizer.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c nlme.c -o nlme.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c nlmefit.c -o nlmefit.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c pdMat.c -o pdMat.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c pythag.c -o pythag.o gfortran -fPIC -g -O2 -c rs.f -o rs.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/nlme/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nlme) building/updating vignettes for package 'stats' ... processing 'reshape.Rnw' * installing *source* package 'Matrix' ... ** package 'Matrix' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c Csparse.c -o Csparse.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c attrib.c -o attrib.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c bind.c -o bind.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c cholmod-common.c -o cholmod-common.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c cholmod-etc.c -o cholmod-etc.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c coerce.c -o coerce.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c cs-etc.c -o cs-etc.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c dense.c -o dense.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c determinant.c -o determinant.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c expm.c -o expm.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c factor.c -o factor.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c idz.c -o idz.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c init.c -o init.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c kappa.c -o kappa.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c matmult.c -o matmult.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c objects.c -o objects.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c perm.c -o perm.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c solve.c -o solve.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c sparse.c -o sparse.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c subassign.c -o subassign.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c subscript.c -o subscript.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c utils-R.c -o utils-R.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c utils.c -o utils.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c validity.c -o validity.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fPIC -g -O2 -c vector.c -o vector.o cd SuiteSparse/CHOLMOD && /Library/Developer/CommandLineTools/usr/bin/make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/Users/pd/r-devel/BUILD-dist/include\" -I\"/Users/pd/r-devel/BUILD-dist/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-g -O2 -fPIC -fvisibility=hidden" AR="ar" RANLIB="ranlib" gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Check/cholmod_check.c -o Check/cholmod_check.o cd SuiteSparse/CCOLAMD && /Library/Developer/CommandLineTools/usr/bin/make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/Users/pd/r-devel/BUILD-dist/include\" -I\"/Users/pd/r-devel/BUILD-dist/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-g -O2 -fPIC -fvisibility=hidden" AR="ar" RANLIB="ranlib" gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/ccolamd.c -o Source/ccolamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Check/cholmod_l_check.c -o Check/cholmod_l_check.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/ccolamd_l.c -o Source/ccolamd_l.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Check/cholmod_read.c -o Check/cholmod_read.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/ccolamd_version.c -o Source/ccolamd_version.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Check/cholmod_l_read.c -o Check/cholmod_l_read.o rm -f CCOLAMD.a ar -cr CCOLAMD.a Source/ccolamd.o Source/ccolamd_l.o Source/ccolamd_version.o ranlib CCOLAMD.a gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Check/cholmod_write.c -o Check/cholmod_write.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Check/cholmod_l_write.c -o Check/cholmod_l_write.o cd SuiteSparse/CAMD && /Library/Developer/CommandLineTools/usr/bin/make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/Users/pd/r-devel/BUILD-dist/include\" -I\"/Users/pd/r-devel/BUILD-dist/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-g -O2 -fPIC -fvisibility=hidden" AR="ar" RANLIB="ranlib" gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_1.c -o Source/camd_1.o cd SuiteSparse/COLAMD && /Library/Developer/CommandLineTools/usr/bin/make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/Users/pd/r-devel/BUILD-dist/include\" -I\"/Users/pd/r-devel/BUILD-dist/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-g -O2 -fPIC -fvisibility=hidden" AR="ar" RANLIB="ranlib" gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/colamd.c -o Source/colamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_amd.c -o Cholesky/cholmod_amd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l1.c -o Source/camd_l1.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_amd.c -o Cholesky/cholmod_l_amd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_2.c -o Source/camd_2.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_analyze.c -o Cholesky/cholmod_analyze.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/colamd_l.c -o Source/colamd_l.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_analyze.c -o Cholesky/cholmod_l_analyze.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l2.c -o Source/camd_l2.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_colamd.c -o Cholesky/cholmod_colamd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/colamd_version.c -o Source/colamd_version.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_aat.c -o Source/camd_aat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_colamd.c -o Cholesky/cholmod_l_colamd.o rm -f COLAMD.a ar -cr COLAMD.a Source/colamd.o Source/colamd_l.o Source/colamd_version.o ranlib COLAMD.a gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l_aat.c -o Source/camd_l_aat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_etree.c -o Cholesky/cholmod_etree.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_etree.c -o Cholesky/cholmod_l_etree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_control.c -o Source/camd_control.o cd SuiteSparse/AMD && /Library/Developer/CommandLineTools/usr/bin/make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/Users/pd/r-devel/BUILD-dist/include\" -I\"/Users/pd/r-devel/BUILD-dist/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-g -O2 -fPIC -fvisibility=hidden" AR="ar" RANLIB="ranlib" gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_1.c -o Source/amd_1.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_factorize.c -o Cholesky/cholmod_factorize.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l_control.c -o Source/camd_l_control.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l1.c -o Source/amd_l1.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_factorize.c -o Cholesky/cholmod_l_factorize.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_defaults.c -o Source/camd_defaults.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_2.c -o Source/amd_2.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l_defaults.c -o Source/camd_l_defaults.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_postorder.c -o Cholesky/cholmod_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_dump.c -o Source/camd_dump.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_postorder.c -o Cholesky/cholmod_l_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l_dump.c -o Source/camd_l_dump.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_rcond.c -o Cholesky/cholmod_rcond.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_info.c -o Source/camd_info.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l2.c -o Source/amd_l2.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l_info.c -o Source/camd_l_info.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_rcond.c -o Cholesky/cholmod_l_rcond.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_order.c -o Source/camd_order.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_aat.c -o Source/amd_aat.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l_order.c -o Source/camd_l_order.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_resymbol.c -o Cholesky/cholmod_resymbol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_aat.c -o Source/amd_l_aat.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_postorder.c -o Source/camd_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_control.c -o Source/amd_control.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l_postorder.c -o Source/camd_l_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_control.c -o Source/amd_l_control.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_preprocess.c -o Source/camd_preprocess.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_defaults.c -o Source/amd_defaults.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l_preprocess.c -o Source/camd_l_preprocess.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_resymbol.c -o Cholesky/cholmod_l_resymbol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_defaults.c -o Source/amd_l_defaults.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_valid.c -o Source/camd_valid.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_dump.c -o Source/amd_dump.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_l_valid.c -o Source/camd_l_valid.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_dump.c -o Source/amd_l_dump.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_info.c -o Source/amd_info.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/camd_version.c -o Source/camd_version.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_rowcolcounts.c -o Cholesky/cholmod_rowcolcounts.o rm -f CAMD.a ar -cr CAMD.a Source/camd_1.o Source/camd_l1.o Source/camd_2.o Source/camd_l2.o Source/camd_aat.o Source/camd_l_aat.o Source/camd_control.o Source/camd_l_control.o Source/camd_defaults.o Source/camd_l_defaults.o Source/camd_dump.o Source/camd_l_dump.o Source/camd_info.o Source/camd_l_info.o Source/camd_order.o Source/camd_l_order.o Source/camd_postorder.o Source/camd_l_postorder.o Source/camd_preprocess.o Source/camd_l_preprocess.o Source/camd_valid.o Source/camd_l_valid.o Source/camd_version.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_info.c -o Source/amd_l_info.o /Library/Developer/CommandLineTools/usr/bin/ranlib: file: CAMD.a(camd_dump.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: CAMD.a(camd_l_dump.o) has no symbols ranlib CAMD.a /Library/Developer/CommandLineTools/usr/bin/ranlib: file: CAMD.a(camd_dump.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: CAMD.a(camd_l_dump.o) has no symbols gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_rowcolcounts.c -o Cholesky/cholmod_l_rowcolcounts.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_order.c -o Source/amd_order.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_rowfac.c -o Cholesky/cholmod_rowfac.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_order.c -o Source/amd_l_order.o cd SuiteSparse/CXSparse && /Library/Developer/CommandLineTools/usr/bin/make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/Users/pd/r-devel/BUILD-dist/include\" -I\"/Users/pd/r-devel/BUILD-dist/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-g -O2 -fPIC -fvisibility=hidden" AR="ar" RANLIB="ranlib" gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_add.c -o Source/cs_add.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_post_tree.c -o Source/amd_post_tree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_add.c -o Source/cs_dl_add.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_post_tree.c -o Source/amd_l_post_tree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_add.c -o Source/cs_ci_add.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_postorder.c -o Source/amd_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_add.c -o Source/cs_cl_add.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_postorder.c -o Source/amd_l_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_amd.c -o Source/cs_amd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_preprocess.c -o Source/amd_preprocess.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_preprocess.c -o Source/amd_l_preprocess.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_valid.c -o Source/amd_valid.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_amd.c -o Source/cs_dl_amd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_l_valid.c -o Source/amd_l_valid.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/amd_version.c -o Source/amd_version.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_amd.c -o Source/cs_ci_amd.o rm -f AMD.a ar -cr AMD.a Source/amd_1.o Source/amd_l1.o Source/amd_2.o Source/amd_l2.o Source/amd_aat.o Source/amd_l_aat.o Source/amd_control.o Source/amd_l_control.o Source/amd_defaults.o Source/amd_l_defaults.o Source/amd_dump.o Source/amd_l_dump.o Source/amd_info.o Source/amd_l_info.o Source/amd_order.o Source/amd_l_order.o Source/amd_post_tree.o Source/amd_l_post_tree.o Source/amd_postorder.o Source/amd_l_postorder.o Source/amd_preprocess.o Source/amd_l_preprocess.o Source/amd_valid.o Source/amd_l_valid.o Source/amd_version.o /Library/Developer/CommandLineTools/usr/bin/ranlib: file: AMD.a(amd_dump.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: AMD.a(amd_l_dump.o) has no symbols ranlib AMD.a /Library/Developer/CommandLineTools/usr/bin/ranlib: file: AMD.a(amd_dump.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: AMD.a(amd_l_dump.o) has no symbols gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_rowfac.c -o Cholesky/cholmod_l_rowfac.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_amd.c -o Source/cs_cl_amd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_chol.c -o Source/cs_chol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_chol.c -o Source/cs_dl_chol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_chol.c -o Source/cs_ci_chol.o cd SuiteSparse/SuiteSparse_config && /Library/Developer/CommandLineTools/usr/bin/make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/Users/pd/r-devel/BUILD-dist/include\" -I\"/Users/pd/r-devel/BUILD-dist/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-g -O2 -fPIC -fvisibility=hidden" AR="ar" RANLIB="ranlib" gcc -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c SuiteSparse_config.c -o SuiteSparse_config.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_chol.c -o Source/cs_cl_chol.o rm -f SuiteSparse_config.a ar -cr SuiteSparse_config.a SuiteSparse_config.o ranlib SuiteSparse_config.a gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_solve.c -o Cholesky/cholmod_solve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cholsol.c -o Source/cs_cholsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_cholsol.c -o Source/cs_dl_cholsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_cholsol.c -o Source/cs_ci_cholsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_cholsol.c -o Source/cs_cl_cholsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_compress.c -o Source/cs_compress.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_compress.c -o Source/cs_dl_compress.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_compress.c -o Source/cs_ci_compress.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_compress.c -o Source/cs_cl_compress.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_convert.c -o Source/cs_convert.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_counts.c -o Source/cs_counts.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_solve.c -o Cholesky/cholmod_l_solve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_counts.c -o Source/cs_dl_counts.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_counts.c -o Source/cs_ci_counts.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_counts.c -o Source/cs_cl_counts.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cumsum.c -o Source/cs_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_cumsum.c -o Source/cs_dl_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_cumsum.c -o Source/cs_ci_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_cumsum.c -o Source/cs_cl_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dfs.c -o Source/cs_dfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_dfs.c -o Source/cs_dl_dfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_dfs.c -o Source/cs_ci_dfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_dfs.c -o Source/cs_cl_dfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dmperm.c -o Source/cs_dmperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_dmperm.c -o Source/cs_dl_dmperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_dmperm.c -o Source/cs_ci_dmperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_dmperm.c -o Source/cs_cl_dmperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_droptol.c -o Source/cs_droptol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_spsolve.c -o Cholesky/cholmod_spsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_droptol.c -o Source/cs_dl_droptol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_droptol.c -o Source/cs_ci_droptol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_droptol.c -o Source/cs_cl_droptol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dropzeros.c -o Source/cs_dropzeros.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_dropzeros.c -o Source/cs_dl_dropzeros.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Cholesky/cholmod_l_spsolve.c -o Cholesky/cholmod_l_spsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_dropzeros.c -o Source/cs_ci_dropzeros.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_dropzeros.c -o Source/cs_cl_dropzeros.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dupl.c -o Source/cs_dupl.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_dupl.c -o Source/cs_dl_dupl.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_aat.c -o Utility/cholmod_aat.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_dupl.c -o Source/cs_ci_dupl.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_aat.c -o Utility/cholmod_l_aat.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_dupl.c -o Source/cs_cl_dupl.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_entry.c -o Source/cs_entry.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_entry.c -o Source/cs_dl_entry.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_add.c -o Utility/cholmod_add.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_add.c -o Utility/cholmod_l_add.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_entry.c -o Source/cs_ci_entry.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_entry.c -o Source/cs_cl_entry.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ereach.c -o Source/cs_ereach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_ereach.c -o Source/cs_dl_ereach.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_add_size_t.c -o Utility/cholmod_add_size_t.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_ereach.c -o Source/cs_ci_ereach.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_add_size_t.c -o Utility/cholmod_l_add_size_t.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_alloc_factor.c -o Utility/cholmod_alloc_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_ereach.c -o Source/cs_cl_ereach.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_alloc_factor.c -o Utility/cholmod_l_alloc_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_etree.c -o Source/cs_etree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_etree.c -o Source/cs_dl_etree.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_alloc_work.c -o Utility/cholmod_alloc_work.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_alloc_work.c -o Utility/cholmod_l_alloc_work.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_etree.c -o Source/cs_ci_etree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_etree.c -o Source/cs_cl_etree.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_allocate_dense.c -o Utility/cholmod_allocate_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_allocate_dense.c -o Utility/cholmod_l_allocate_dense.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_fkeep.c -o Source/cs_fkeep.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_fkeep.c -o Source/cs_dl_fkeep.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_allocate_factor.c -o Utility/cholmod_allocate_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_fkeep.c -o Source/cs_ci_fkeep.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_allocate_factor.c -o Utility/cholmod_l_allocate_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_fkeep.c -o Source/cs_cl_fkeep.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_allocate_sparse.c -o Utility/cholmod_allocate_sparse.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_gaxpy.c -o Source/cs_gaxpy.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_allocate_sparse.c -o Utility/cholmod_l_allocate_sparse.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_gaxpy.c -o Source/cs_dl_gaxpy.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_allocate_triplet.c -o Utility/cholmod_allocate_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_allocate_triplet.c -o Utility/cholmod_l_allocate_triplet.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_gaxpy.c -o Source/cs_ci_gaxpy.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_gaxpy.c -o Source/cs_cl_gaxpy.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_allocate_work.c -o Utility/cholmod_allocate_work.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_happly.c -o Source/cs_happly.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_happly.c -o Source/cs_dl_happly.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_allocate_work.c -o Utility/cholmod_l_allocate_work.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_happly.c -o Source/cs_ci_happly.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_band.c -o Utility/cholmod_band.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_band.c -o Utility/cholmod_l_band.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_happly.c -o Source/cs_cl_happly.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_band_nnz.c -o Utility/cholmod_band_nnz.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_house.c -o Source/cs_house.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_house.c -o Source/cs_dl_house.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_house.c -o Source/cs_ci_house.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_band_nnz.c -o Utility/cholmod_l_band_nnz.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_house.c -o Source/cs_cl_house.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_calloc.c -o Utility/cholmod_calloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_calloc.c -o Utility/cholmod_l_calloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_change_factor.c -o Utility/cholmod_change_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ipvec.c -o Source/cs_ipvec.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_change_factor.c -o Utility/cholmod_l_change_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_ipvec.c -o Source/cs_dl_ipvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_ipvec.c -o Source/cs_ci_ipvec.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_clear_flag.c -o Utility/cholmod_clear_flag.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_ipvec.c -o Source/cs_cl_ipvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_leaf.c -o Source/cs_leaf.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_leaf.c -o Source/cs_dl_leaf.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_clear_flag.c -o Utility/cholmod_l_clear_flag.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_leaf.c -o Source/cs_ci_leaf.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_leaf.c -o Source/cs_cl_leaf.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_copy.c -o Utility/cholmod_copy.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_load.c -o Source/cs_load.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_load.c -o Source/cs_dl_load.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_load.c -o Source/cs_ci_load.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_load.c -o Source/cs_cl_load.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_copy.c -o Utility/cholmod_l_copy.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_lsolve.c -o Source/cs_lsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_lsolve.c -o Source/cs_dl_lsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_lsolve.c -o Source/cs_ci_lsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_lsolve.c -o Source/cs_cl_lsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ltsolve.c -o Source/cs_ltsolve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_copy_dense.c -o Utility/cholmod_copy_dense.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_ltsolve.c -o Source/cs_dl_ltsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_ltsolve.c -o Source/cs_ci_ltsolve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_copy_dense.c -o Utility/cholmod_l_copy_dense.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_ltsolve.c -o Source/cs_cl_ltsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_lu.c -o Source/cs_lu.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_copy_dense2.c -o Utility/cholmod_copy_dense2.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_lu.c -o Source/cs_dl_lu.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_lu.c -o Source/cs_ci_lu.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_copy_dense2.c -o Utility/cholmod_l_copy_dense2.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_lu.c -o Source/cs_cl_lu.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_lusol.c -o Source/cs_lusol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_copy_factor.c -o Utility/cholmod_copy_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_lusol.c -o Source/cs_dl_lusol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_lusol.c -o Source/cs_ci_lusol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_lusol.c -o Source/cs_cl_lusol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_malloc.c -o Source/cs_malloc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_malloc.c -o Source/cs_dl_malloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_copy_factor.c -o Utility/cholmod_l_copy_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_copy_sparse.c -o Utility/cholmod_copy_sparse.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_malloc.c -o Source/cs_ci_malloc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_malloc.c -o Source/cs_cl_malloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_copy_sparse.c -o Utility/cholmod_l_copy_sparse.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_maxtrans.c -o Source/cs_maxtrans.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_maxtrans.c -o Source/cs_dl_maxtrans.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_maxtrans.c -o Source/cs_ci_maxtrans.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_copy_triplet.c -o Utility/cholmod_copy_triplet.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_maxtrans.c -o Source/cs_cl_maxtrans.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_copy_triplet.c -o Utility/cholmod_l_copy_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_cumsum.c -o Utility/cholmod_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_multiply.c -o Source/cs_multiply.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_cumsum.c -o Utility/cholmod_l_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_multiply.c -o Source/cs_dl_multiply.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_multiply.c -o Source/cs_ci_multiply.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_dbound.c -o Utility/cholmod_dbound.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_multiply.c -o Source/cs_cl_multiply.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_dbound.c -o Utility/cholmod_l_dbound.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_defaults.c -o Utility/cholmod_defaults.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_norm.c -o Source/cs_norm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_norm.c -o Source/cs_dl_norm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_defaults.c -o Utility/cholmod_l_defaults.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_dense_nnz.c -o Utility/cholmod_dense_nnz.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_dense_nnz.c -o Utility/cholmod_l_dense_nnz.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_norm.c -o Source/cs_ci_norm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_dense_to_sparse.c -o Utility/cholmod_dense_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_dense_to_sparse.c -o Utility/cholmod_l_dense_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_divcomplex.c -o Utility/cholmod_divcomplex.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_norm.c -o Source/cs_cl_norm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_divcomplex.c -o Utility/cholmod_l_divcomplex.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_permute.c -o Source/cs_permute.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_permute.c -o Source/cs_dl_permute.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_permute.c -o Source/cs_ci_permute.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_ensure_dense.c -o Utility/cholmod_ensure_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_ensure_dense.c -o Utility/cholmod_l_ensure_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_error.c -o Utility/cholmod_error.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_error.c -o Utility/cholmod_l_error.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_permute.c -o Source/cs_cl_permute.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_pinv.c -o Source/cs_pinv.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_pinv.c -o Source/cs_dl_pinv.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_eye.c -o Utility/cholmod_eye.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_eye.c -o Utility/cholmod_l_eye.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_factor_to_sparse.c -o Utility/cholmod_factor_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_pinv.c -o Source/cs_ci_pinv.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_factor_to_sparse.c -o Utility/cholmod_l_factor_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_pinv.c -o Source/cs_cl_pinv.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_finish.c -o Utility/cholmod_finish.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_finish.c -o Utility/cholmod_l_finish.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_post.c -o Source/cs_post.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_post.c -o Source/cs_dl_post.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_post.c -o Source/cs_ci_post.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_free.c -o Utility/cholmod_free.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_free.c -o Utility/cholmod_l_free.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_post.c -o Source/cs_cl_post.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_free_dense.c -o Utility/cholmod_free_dense.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_print.c -o Source/cs_print.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_print.c -o Source/cs_dl_print.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_free_dense.c -o Utility/cholmod_l_free_dense.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_print.c -o Source/cs_ci_print.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_free_factor.c -o Utility/cholmod_free_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_free_factor.c -o Utility/cholmod_l_free_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_print.c -o Source/cs_cl_print.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_free_sparse.c -o Utility/cholmod_free_sparse.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_pvec.c -o Source/cs_pvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_pvec.c -o Source/cs_dl_pvec.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_free_sparse.c -o Utility/cholmod_l_free_sparse.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_pvec.c -o Source/cs_ci_pvec.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_free_triplet.c -o Utility/cholmod_free_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_free_triplet.c -o Utility/cholmod_l_free_triplet.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_pvec.c -o Source/cs_cl_pvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_qr.c -o Source/cs_qr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_qr.c -o Source/cs_dl_qr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_qr.c -o Source/cs_ci_qr.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_free_work.c -o Utility/cholmod_free_work.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_qr.c -o Source/cs_cl_qr.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_free_work.c -o Utility/cholmod_l_free_work.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_qrsol.c -o Source/cs_qrsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_qrsol.c -o Source/cs_dl_qrsol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_hypot.c -o Utility/cholmod_hypot.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_hypot.c -o Utility/cholmod_l_hypot.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_malloc.c -o Utility/cholmod_malloc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_qrsol.c -o Source/cs_ci_qrsol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_malloc.c -o Utility/cholmod_l_malloc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_qrsol.c -o Source/cs_cl_qrsol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_maxrank.c -o Utility/cholmod_maxrank.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_maxrank.c -o Utility/cholmod_l_maxrank.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_randperm.c -o Source/cs_randperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_randperm.c -o Source/cs_dl_randperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_randperm.c -o Source/cs_ci_randperm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_memdebug.c -o Utility/cholmod_memdebug.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_mult_size_t.c -o Utility/cholmod_mult_size_t.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_randperm.c -o Source/cs_cl_randperm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_mult_size_t.c -o Utility/cholmod_l_mult_size_t.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_reach.c -o Source/cs_reach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_reach.c -o Source/cs_dl_reach.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_mult_uint64_t.c -o Utility/cholmod_mult_uint64_t.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_reach.c -o Source/cs_ci_reach.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_nnz.c -o Utility/cholmod_nnz.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_reach.c -o Source/cs_cl_reach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_scatter.c -o Source/cs_scatter.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_nnz.c -o Utility/cholmod_l_nnz.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_scatter.c -o Source/cs_dl_scatter.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_ones.c -o Utility/cholmod_ones.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_ones.c -o Utility/cholmod_l_ones.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_scatter.c -o Source/cs_ci_scatter.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_scatter.c -o Source/cs_cl_scatter.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_scc.c -o Source/cs_scc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_scc.c -o Source/cs_dl_scc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_pack_factor.c -o Utility/cholmod_pack_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_scc.c -o Source/cs_ci_scc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_pack_factor.c -o Utility/cholmod_l_pack_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_ptranspose.c -o Utility/cholmod_ptranspose.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_scc.c -o Source/cs_cl_scc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_schol.c -o Source/cs_schol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_ptranspose.c -o Utility/cholmod_l_ptranspose.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_realloc.c -o Utility/cholmod_realloc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_schol.c -o Source/cs_dl_schol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_realloc.c -o Utility/cholmod_l_realloc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_schol.c -o Source/cs_ci_schol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_realloc_multiple.c -o Utility/cholmod_realloc_multiple.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_realloc_multiple.c -o Utility/cholmod_l_realloc_multiple.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_schol.c -o Source/cs_cl_schol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_spsolve.c -o Source/cs_spsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_spsolve.c -o Source/cs_dl_spsolve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_reallocate_column.c -o Utility/cholmod_reallocate_column.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_reallocate_column.c -o Utility/cholmod_l_reallocate_column.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_reallocate_factor.c -o Utility/cholmod_reallocate_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_spsolve.c -o Source/cs_ci_spsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_spsolve.c -o Source/cs_cl_spsolve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_reallocate_factor.c -o Utility/cholmod_l_reallocate_factor.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_sqr.c -o Source/cs_sqr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_sqr.c -o Source/cs_dl_sqr.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_reallocate_sparse.c -o Utility/cholmod_reallocate_sparse.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_sqr.c -o Source/cs_ci_sqr.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_reallocate_sparse.c -o Utility/cholmod_l_reallocate_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_reallocate_triplet.c -o Utility/cholmod_reallocate_triplet.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_sqr.c -o Source/cs_cl_sqr.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_reallocate_triplet.c -o Utility/cholmod_l_reallocate_triplet.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_symperm.c -o Source/cs_symperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_symperm.c -o Source/cs_dl_symperm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_sbound.c -o Utility/cholmod_sbound.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_sbound.c -o Utility/cholmod_l_sbound.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_score_comp.c -o Utility/cholmod_score_comp.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_symperm.c -o Source/cs_ci_symperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_symperm.c -o Source/cs_cl_symperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_tdfs.c -o Source/cs_tdfs.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_score_comp.c -o Utility/cholmod_l_score_comp.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_set_empty.c -o Utility/cholmod_set_empty.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_set_empty.c -o Utility/cholmod_l_set_empty.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_tdfs.c -o Source/cs_dl_tdfs.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_sort.c -o Utility/cholmod_sort.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_tdfs.c -o Source/cs_ci_tdfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_tdfs.c -o Source/cs_cl_tdfs.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_sort.c -o Utility/cholmod_l_sort.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_sparse_to_dense.c -o Utility/cholmod_sparse_to_dense.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_transpose.c -o Source/cs_transpose.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_transpose.c -o Source/cs_dl_transpose.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_transpose.c -o Source/cs_ci_transpose.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_transpose.c -o Source/cs_cl_transpose.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_sparse_to_dense.c -o Utility/cholmod_l_sparse_to_dense.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_updown.c -o Source/cs_updown.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_sparse_to_triplet.c -o Utility/cholmod_sparse_to_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_sparse_to_triplet.c -o Utility/cholmod_l_sparse_to_triplet.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_updown.c -o Source/cs_dl_updown.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_updown.c -o Source/cs_ci_updown.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_speye.c -o Utility/cholmod_speye.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_updown.c -o Source/cs_cl_updown.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_speye.c -o Utility/cholmod_l_speye.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_usolve.c -o Source/cs_usolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_usolve.c -o Source/cs_dl_usolve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_spzeros.c -o Utility/cholmod_spzeros.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_spzeros.c -o Utility/cholmod_l_spzeros.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_start.c -o Utility/cholmod_start.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_usolve.c -o Source/cs_ci_usolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_usolve.c -o Source/cs_cl_usolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_util.c -o Source/cs_util.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_start.c -o Utility/cholmod_l_start.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_transpose.c -o Utility/cholmod_transpose.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_transpose.c -o Utility/cholmod_l_transpose.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_util.c -o Source/cs_dl_util.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_transpose_sym.c -o Utility/cholmod_transpose_sym.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_util.c -o Source/cs_ci_util.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_util.c -o Source/cs_cl_util.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_transpose_sym.c -o Utility/cholmod_l_transpose_sym.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_transpose_unsym.c -o Utility/cholmod_transpose_unsym.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_utsolve.c -o Source/cs_utsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_dl_utsolve.c -o Source/cs_dl_utsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_ci_utsolve.c -o Source/cs_ci_utsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cs_cl_utsolve.c -o Source/cs_cl_utsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Source/cxsparse_version.c -o Source/cxsparse_version.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_transpose_unsym.c -o Utility/cholmod_l_transpose_unsym.o rm -f CXSparse.a ar -cr CXSparse.a Source/cs_add.o Source/cs_dl_add.o Source/cs_ci_add.o Source/cs_cl_add.o Source/cs_amd.o Source/cs_dl_amd.o Source/cs_ci_amd.o Source/cs_cl_amd.o Source/cs_chol.o Source/cs_dl_chol.o Source/cs_ci_chol.o Source/cs_cl_chol.o Source/cs_cholsol.o Source/cs_dl_cholsol.o Source/cs_ci_cholsol.o Source/cs_cl_cholsol.o Source/cs_compress.o Source/cs_dl_compress.o Source/cs_ci_compress.o Source/cs_cl_compress.o Source/cs_convert.o Source/cs_counts.o Source/cs_dl_counts.o Source/cs_ci_counts.o Source/cs_cl_counts.o Source/cs_cumsum.o Source/cs_dl_cumsum.o Source/cs_ci_cumsum.o Source/cs_cl_cumsum.o Source/cs_dfs.o Source/cs_dl_dfs.o Source/cs_ci_dfs.o Source/cs_cl_dfs.o Source/cs_dmperm.o Source/cs_dl_dmperm.o Source/cs_ci_dmperm.o Source/cs_cl_dmperm.o Source/cs_droptol.o Source/cs_dl_droptol.o Source/cs_ci_droptol.o Source/cs_cl_droptol.o Source/cs_dropzeros.o Source/cs_dl_dropzeros.o Source/cs_ci_dropzeros.o Source/cs_cl_dropzeros.o Source/cs_dupl.o Source/cs_dl_dupl.o Source/cs_ci_dupl.o Source/cs_cl_dupl.o Source/cs_entry.o Source/cs_dl_entry.o Source/cs_ci_entry.o Source/cs_cl_entry.o Source/cs_ereach.o Source/cs_dl_ereach.o Source/cs_ci_ereach.o Source/cs_cl_ereach.o Source/cs_etree.o Source/cs_dl_etree.o Source/cs_ci_etree.o Source/cs_cl_etree.o Source/cs_fkeep.o Source/cs_dl_fkeep.o Source/cs_ci_fkeep.o Source/cs_cl_fkeep.o Source/cs_gaxpy.o Source/cs_dl_gaxpy.o Source/cs_ci_gaxpy.o Source/cs_cl_gaxpy.o Source/cs_happly.o Source/cs_dl_happly.o Source/cs_ci_happly.o Source/cs_cl_happly.o Source/cs_house.o Source/cs_dl_house.o Source/cs_ci_house.o Source/cs_cl_house.o Source/cs_ipvec.o Source/cs_dl_ipvec.o Source/cs_ci_ipvec.o Source/cs_cl_ipvec.o Source/cs_leaf.o Source/cs_dl_leaf.o Source/cs_ci_leaf.o Source/cs_cl_leaf.o Source/cs_load.o Source/cs_dl_load.o Source/cs_ci_load.o Source/cs_cl_load.o Source/cs_lsolve.o Source/cs_dl_lsolve.o Source/cs_ci_lsolve.o Source/cs_cl_lsolve.o Source/cs_ltsolve.o Source/cs_dl_ltsolve.o Source/cs_ci_ltsolve.o Source/cs_cl_ltsolve.o Source/cs_lu.o Source/cs_dl_lu.o Source/cs_ci_lu.o Source/cs_cl_lu.o Source/cs_lusol.o Source/cs_dl_lusol.o Source/cs_ci_lusol.o Source/cs_cl_lusol.o Source/cs_malloc.o Source/cs_dl_malloc.o Source/cs_ci_malloc.o Source/cs_cl_malloc.o Source/cs_maxtrans.o Source/cs_dl_maxtrans.o Source/cs_ci_maxtrans.o Source/cs_cl_maxtrans.o Source/cs_multiply.o Source/cs_dl_multiply.o Source/cs_ci_multiply.o Source/cs_cl_multiply.o Source/cs_norm.o Source/cs_dl_norm.o Source/cs_ci_norm.o Source/cs_cl_norm.o Source/cs_permute.o Source/cs_dl_permute.o Source/cs_ci_permute.o Source/cs_cl_permute.o Source/cs_pinv.o Source/cs_dl_pinv.o Source/cs_ci_pinv.o Source/cs_cl_pinv.o Source/cs_post.o Source/cs_dl_post.o Source/cs_ci_post.o Source/cs_cl_post.o Source/cs_print.o Source/cs_dl_print.o Source/cs_ci_print.o Source/cs_cl_print.o Source/cs_pvec.o Source/cs_dl_pvec.o Source/cs_ci_pvec.o Source/cs_cl_pvec.o Source/cs_qr.o Source/cs_dl_qr.o Source/cs_ci_qr.o Source/cs_cl_qr.o Source/cs_qrsol.o Source/cs_dl_qrsol.o Source/cs_ci_qrsol.o Source/cs_cl_qrsol.o Source/cs_randperm.o Source/cs_dl_randperm.o Source/cs_ci_randperm.o Source/cs_cl_randperm.o Source/cs_reach.o Source/cs_dl_reach.o Source/cs_ci_reach.o Source/cs_cl_reach.o Source/cs_scatter.o Source/cs_dl_scatter.o Source/cs_ci_scatter.o Source/cs_cl_scatter.o Source/cs_scc.o Source/cs_dl_scc.o Source/cs_ci_scc.o Source/cs_cl_scc.o Source/cs_schol.o Source/cs_dl_schol.o Source/cs_ci_schol.o Source/cs_cl_schol.o Source/cs_spsolve.o Source/cs_dl_spsolve.o Source/cs_ci_spsolve.o Source/cs_cl_spsolve.o Source/cs_sqr.o Source/cs_dl_sqr.o Source/cs_ci_sqr.o Source/cs_cl_sqr.o Source/cs_symperm.o Source/cs_dl_symperm.o Source/cs_ci_symperm.o Source/cs_cl_symperm.o Source/cs_tdfs.o Source/cs_dl_tdfs.o Source/cs_ci_tdfs.o Source/cs_cl_tdfs.o Source/cs_transpose.o Source/cs_dl_transpose.o Source/cs_ci_transpose.o Source/cs_cl_transpose.o Source/cs_updown.o Source/cs_dl_updown.o Source/cs_ci_updown.o Source/cs_cl_updown.o Source/cs_usolve.o Source/cs_dl_usolve.o Source/cs_ci_usolve.o Source/cs_cl_usolve.o Source/cs_util.o Source/cs_dl_util.o Source/cs_ci_util.o Source/cs_cl_util.o Source/cs_utsolve.o Source/cs_dl_utsolve.o Source/cs_ci_utsolve.o Source/cs_cl_utsolve.o Source/cxsparse_version.o ranlib CXSparse.a gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_triplet_to_sparse.c -o Utility/cholmod_triplet_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_triplet_to_sparse.c -o Utility/cholmod_l_triplet_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_version.c -o Utility/cholmod_version.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_version.c -o Utility/cholmod_l_version.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_xtype.c -o Utility/cholmod_xtype.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_xtype.c -o Utility/cholmod_l_xtype.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_zeros.c -o Utility/cholmod_zeros.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Utility/cholmod_l_zeros.c -o Utility/cholmod_l_zeros.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_drop.c -o MatrixOps/cholmod_drop.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_l_drop.c -o MatrixOps/cholmod_l_drop.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_horzcat.c -o MatrixOps/cholmod_horzcat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_l_horzcat.c -o MatrixOps/cholmod_l_horzcat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_norm.c -o MatrixOps/cholmod_norm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_l_norm.c -o MatrixOps/cholmod_l_norm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_scale.c -o MatrixOps/cholmod_scale.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_l_scale.c -o MatrixOps/cholmod_l_scale.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_sdmult.c -o MatrixOps/cholmod_sdmult.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_l_sdmult.c -o MatrixOps/cholmod_l_sdmult.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_ssmult.c -o MatrixOps/cholmod_ssmult.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_l_ssmult.c -o MatrixOps/cholmod_l_ssmult.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_submatrix.c -o MatrixOps/cholmod_submatrix.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_l_submatrix.c -o MatrixOps/cholmod_l_submatrix.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_symmetry.c -o MatrixOps/cholmod_symmetry.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_l_symmetry.c -o MatrixOps/cholmod_l_symmetry.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_vertcat.c -o MatrixOps/cholmod_vertcat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c MatrixOps/cholmod_l_vertcat.c -o MatrixOps/cholmod_l_vertcat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Modify/cholmod_rowadd.c -o Modify/cholmod_rowadd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Modify/cholmod_l_rowadd.c -o Modify/cholmod_l_rowadd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Modify/cholmod_rowdel.c -o Modify/cholmod_rowdel.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Modify/cholmod_l_rowdel.c -o Modify/cholmod_l_rowdel.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Modify/cholmod_updown.c -o Modify/cholmod_updown.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Modify/cholmod_l_updown.c -o Modify/cholmod_l_updown.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_camd.c -o Partition/cholmod_camd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_l_camd.c -o Partition/cholmod_l_camd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_ccolamd.c -o Partition/cholmod_ccolamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_l_ccolamd.c -o Partition/cholmod_l_ccolamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_csymamd.c -o Partition/cholmod_csymamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_l_csymamd.c -o Partition/cholmod_l_csymamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_metis.c -o Partition/cholmod_metis.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_l_metis.c -o Partition/cholmod_l_metis.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_metis_wrapper.c -o Partition/cholmod_metis_wrapper.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_nesdis.c -o Partition/cholmod_nesdis.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Partition/cholmod_l_nesdis.c -o Partition/cholmod_l_nesdis.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Supernodal/cholmod_super_numeric.c -o Supernodal/cholmod_super_numeric.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Supernodal/cholmod_l_super_numeric.c -o Supernodal/cholmod_l_super_numeric.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Supernodal/cholmod_super_solve.c -o Supernodal/cholmod_super_solve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Supernodal/cholmod_l_super_solve.c -o Supernodal/cholmod_l_super_solve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Supernodal/cholmod_super_symbolic.c -o Supernodal/cholmod_super_symbolic.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/Users/pd/r-devel/BUILD-dist/include" -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -DNPRINT -DNTIMER -g -O2 -fPIC -fvisibility=hidden -c Supernodal/cholmod_l_super_symbolic.c -o Supernodal/cholmod_l_super_symbolic.o rm -f CHOLMOD.a ar -cr CHOLMOD.a Check/cholmod_check.o Check/cholmod_l_check.o Check/cholmod_read.o Check/cholmod_l_read.o Check/cholmod_write.o Check/cholmod_l_write.o Cholesky/cholmod_amd.o Cholesky/cholmod_l_amd.o Cholesky/cholmod_analyze.o Cholesky/cholmod_l_analyze.o Cholesky/cholmod_colamd.o Cholesky/cholmod_l_colamd.o Cholesky/cholmod_etree.o Cholesky/cholmod_l_etree.o Cholesky/cholmod_factorize.o Cholesky/cholmod_l_factorize.o Cholesky/cholmod_postorder.o Cholesky/cholmod_l_postorder.o Cholesky/cholmod_rcond.o Cholesky/cholmod_l_rcond.o Cholesky/cholmod_resymbol.o Cholesky/cholmod_l_resymbol.o Cholesky/cholmod_rowcolcounts.o Cholesky/cholmod_l_rowcolcounts.o Cholesky/cholmod_rowfac.o Cholesky/cholmod_l_rowfac.o Cholesky/cholmod_solve.o Cholesky/cholmod_l_solve.o Cholesky/cholmod_spsolve.o Cholesky/cholmod_l_spsolve.o Utility/cholmod_aat.o Utility/cholmod_l_aat.o Utility/cholmod_add.o Utility/cholmod_l_add.o Utility/cholmod_add_size_t.o Utility/cholmod_l_add_size_t.o Utility/cholmod_alloc_factor.o Utility/cholmod_l_alloc_factor.o Utility/cholmod_alloc_work.o Utility/cholmod_l_alloc_work.o Utility/cholmod_allocate_dense.o Utility/cholmod_l_allocate_dense.o Utility/cholmod_allocate_factor.o Utility/cholmod_l_allocate_factor.o Utility/cholmod_allocate_sparse.o Utility/cholmod_l_allocate_sparse.o Utility/cholmod_allocate_triplet.o Utility/cholmod_l_allocate_triplet.o Utility/cholmod_allocate_work.o Utility/cholmod_l_allocate_work.o Utility/cholmod_band.o Utility/cholmod_l_band.o Utility/cholmod_band_nnz.o Utility/cholmod_l_band_nnz.o Utility/cholmod_calloc.o Utility/cholmod_l_calloc.o Utility/cholmod_change_factor.o Utility/cholmod_l_change_factor.o Utility/cholmod_clear_flag.o Utility/cholmod_l_clear_flag.o Utility/cholmod_copy.o Utility/cholmod_l_copy.o Utility/cholmod_copy_dense.o Utility/cholmod_l_copy_dense.o Utility/cholmod_copy_dense2.o Utility/cholmod_l_copy_dense2.o Utility/cholmod_copy_factor.o Utility/cholmod_l_copy_factor.o Utility/cholmod_copy_sparse.o Utility/cholmod_l_copy_sparse.o Utility/cholmod_copy_triplet.o Utility/cholmod_l_copy_triplet.o Utility/cholmod_cumsum.o Utility/cholmod_l_cumsum.o Utility/cholmod_dbound.o Utility/cholmod_l_dbound.o Utility/cholmod_defaults.o Utility/cholmod_l_defaults.o Utility/cholmod_dense_nnz.o Utility/cholmod_l_dense_nnz.o Utility/cholmod_dense_to_sparse.o Utility/cholmod_l_dense_to_sparse.o Utility/cholmod_divcomplex.o Utility/cholmod_l_divcomplex.o Utility/cholmod_ensure_dense.o Utility/cholmod_l_ensure_dense.o Utility/cholmod_error.o Utility/cholmod_l_error.o Utility/cholmod_eye.o Utility/cholmod_l_eye.o Utility/cholmod_factor_to_sparse.o Utility/cholmod_l_factor_to_sparse.o Utility/cholmod_finish.o Utility/cholmod_l_finish.o Utility/cholmod_free.o Utility/cholmod_l_free.o Utility/cholmod_free_dense.o Utility/cholmod_l_free_dense.o Utility/cholmod_free_factor.o Utility/cholmod_l_free_factor.o Utility/cholmod_free_sparse.o Utility/cholmod_l_free_sparse.o Utility/cholmod_free_triplet.o Utility/cholmod_l_free_triplet.o Utility/cholmod_free_work.o Utility/cholmod_l_free_work.o Utility/cholmod_hypot.o Utility/cholmod_l_hypot.o Utility/cholmod_malloc.o Utility/cholmod_l_malloc.o Utility/cholmod_maxrank.o Utility/cholmod_l_maxrank.o Utility/cholmod_memdebug.o Utility/cholmod_mult_size_t.o Utility/cholmod_l_mult_size_t.o Utility/cholmod_mult_uint64_t.o Utility/cholmod_nnz.o Utility/cholmod_l_nnz.o Utility/cholmod_ones.o Utility/cholmod_l_ones.o Utility/cholmod_pack_factor.o Utility/cholmod_l_pack_factor.o Utility/cholmod_ptranspose.o Utility/cholmod_l_ptranspose.o Utility/cholmod_realloc.o Utility/cholmod_l_realloc.o Utility/cholmod_realloc_multiple.o Utility/cholmod_l_realloc_multiple.o Utility/cholmod_reallocate_column.o Utility/cholmod_l_reallocate_column.o Utility/cholmod_reallocate_factor.o Utility/cholmod_l_reallocate_factor.o Utility/cholmod_reallocate_sparse.o Utility/cholmod_l_reallocate_sparse.o Utility/cholmod_reallocate_triplet.o Utility/cholmod_l_reallocate_triplet.o Utility/cholmod_sbound.o Utility/cholmod_l_sbound.o Utility/cholmod_score_comp.o Utility/cholmod_l_score_comp.o Utility/cholmod_set_empty.o Utility/cholmod_l_set_empty.o Utility/cholmod_sort.o Utility/cholmod_l_sort.o Utility/cholmod_sparse_to_dense.o Utility/cholmod_l_sparse_to_dense.o Utility/cholmod_sparse_to_triplet.o Utility/cholmod_l_sparse_to_triplet.o Utility/cholmod_speye.o Utility/cholmod_l_speye.o Utility/cholmod_spzeros.o Utility/cholmod_l_spzeros.o Utility/cholmod_start.o Utility/cholmod_l_start.o Utility/cholmod_transpose.o Utility/cholmod_l_transpose.o Utility/cholmod_transpose_sym.o Utility/cholmod_l_transpose_sym.o Utility/cholmod_transpose_unsym.o Utility/cholmod_l_transpose_unsym.o Utility/cholmod_triplet_to_sparse.o Utility/cholmod_l_triplet_to_sparse.o Utility/cholmod_version.o Utility/cholmod_l_version.o Utility/cholmod_xtype.o Utility/cholmod_l_xtype.o Utility/cholmod_zeros.o Utility/cholmod_l_zeros.o MatrixOps/cholmod_drop.o MatrixOps/cholmod_l_drop.o MatrixOps/cholmod_horzcat.o MatrixOps/cholmod_l_horzcat.o MatrixOps/cholmod_norm.o MatrixOps/cholmod_l_norm.o MatrixOps/cholmod_scale.o MatrixOps/cholmod_l_scale.o MatrixOps/cholmod_sdmult.o MatrixOps/cholmod_l_sdmult.o MatrixOps/cholmod_ssmult.o MatrixOps/cholmod_l_ssmult.o MatrixOps/cholmod_submatrix.o MatrixOps/cholmod_l_submatrix.o MatrixOps/cholmod_symmetry.o MatrixOps/cholmod_l_symmetry.o MatrixOps/cholmod_vertcat.o MatrixOps/cholmod_l_vertcat.o Modify/cholmod_rowadd.o Modify/cholmod_l_rowadd.o Modify/cholmod_rowdel.o Modify/cholmod_l_rowdel.o Modify/cholmod_updown.o Modify/cholmod_l_updown.o Partition/cholmod_camd.o Partition/cholmod_l_camd.o Partition/cholmod_ccolamd.o Partition/cholmod_l_ccolamd.o Partition/cholmod_csymamd.o Partition/cholmod_l_csymamd.o Partition/cholmod_metis.o Partition/cholmod_l_metis.o Partition/cholmod_metis_wrapper.o Partition/cholmod_nesdis.o Partition/cholmod_l_nesdis.o Supernodal/cholmod_super_numeric.o Supernodal/cholmod_l_super_numeric.o Supernodal/cholmod_super_solve.o Supernodal/cholmod_l_super_solve.o Supernodal/cholmod_super_symbolic.o Supernodal/cholmod_l_super_symbolic.o /Library/Developer/CommandLineTools/usr/bin/ranlib: file: CHOLMOD.a(cholmod_memdebug.o) has no symbols ranlib CHOLMOD.a /Library/Developer/CommandLineTools/usr/bin/ranlib: file: CHOLMOD.a(cholmod_memdebug.o) has no symbols gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o Matrix.so Csparse.o attrib.o bind.o cholmod-common.o cholmod-etc.o coerce.o cs-etc.o dense.o determinant.o expm.o factor.o idz.o init.o kappa.o matmult.o objects.o perm.o solve.o sparse.o subassign.o subscript.o utils-R.o utils.o validity.o vector.o SuiteSparse/CHOLMOD/CHOLMOD.a SuiteSparse/CCOLAMD/CCOLAMD.a SuiteSparse/CAMD/CAMD.a SuiteSparse/COLAMD/COLAMD.a SuiteSparse/AMD/AMD.a SuiteSparse/CXSparse/CXSparse.a SuiteSparse/SuiteSparse_config/SuiteSparse_config.a -L/Users/pd/r-devel/BUILD-dist/lib -lRlapack -L/Users/pd/r-devel/BUILD-dist/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/Matrix/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for 'chol2inv' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix' Creating a generic function for 'diag' from package 'base' in package 'Matrix' Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix' Creating a generic function for 'drop' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csc","RsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.coo","RsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","sparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","sparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","sparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"Matrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"Matrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"Matrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"graphAM","TsparseMatrix"': no definition for class "graphAM" in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","RsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","TsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","sparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph" in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"Matrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"Matrix","graph"': no definition for class "graph" Creating a generic function for 'colSums' from package 'base' in package 'Matrix' Creating a generic function for 'colMeans' from package 'base' in package 'Matrix' Creating a generic function for 'rowSums' from package 'base' in package 'Matrix' Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix' Creating a generic function for 'diag<-' from package 'base' in package 'Matrix' Creating a generic function for 'unname' from package 'base' in package 'Matrix' Creating a generic function for 'norm' from package 'base' in package 'Matrix' Creating a generic function for 'rcond' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'rcond' from package 'base' in package 'Matrix' Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix' Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix' Creating a generic function for 'qr.R' from package 'base' in package 'Matrix' Creating a generic function for 'qr.X' from package 'base' in package 'Matrix' Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix' Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix' Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix' Creating a generic function for 'toeplitz' from 'stats' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'toeplitz' from package 'stats' in package 'Matrix' Creating a generic function for 'which' from package 'base' in package 'Matrix' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (Matrix) begin installing recommended package mgcv begin installing recommended package survival * installing *source* package 'survival' ... ** package 'survival' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c agexact.c -o agexact.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c agfit4.c -o agfit4.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c agfit5.c -o agfit5.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c agmart.c -o agmart.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c agmart3.c -o agmart3.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c agscore2.c -o agscore2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c agscore3.c -o agscore3.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c agsurv4.c -o agsurv4.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c agsurv5.c -o agsurv5.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c cdecomp.c -o cdecomp.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c chinv2.c -o chinv2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c chinv3.c -o chinv3.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c cholesky2.c -o cholesky2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c cholesky3.c -o cholesky3.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c cholesky5.c -o cholesky5.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c chsolve2.c -o chsolve2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c chsolve3.c -o chsolve3.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c chsolve5.c -o chsolve5.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c collapse.c -o collapse.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c concordance1.c -o concordance1.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c concordance3.c -o concordance3.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c concordance5.c -o concordance5.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c cox_Rcallback.c -o cox_Rcallback.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxcount1.c -o coxcount1.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxdetail.c -o coxdetail.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxexact.c -o coxexact.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxfit5.c -o coxfit5.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxfit6.c -o coxfit6.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxmart.c -o coxmart.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxmart2.c -o coxmart2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxph_wtest.c -o coxph_wtest.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxsafe.c -o coxsafe.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxscho.c -o coxscho.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxscore2.c -o coxscore2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxsurv1.c -o coxsurv1.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxsurv2.c -o coxsurv2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxsurv3.c -o coxsurv3.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxsurv4.c -o coxsurv4.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c dmatrix.c -o dmatrix.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c doloop.c -o doloop.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c fastkm.c -o fastkm.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c finegray.c -o finegray.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c gchol.c -o gchol.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c multicheck.c -o multicheck.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c norisk.c -o norisk.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c pyears1.c -o pyears1.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c pyears2.c -o pyears2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c pyears3b.c -o pyears3b.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c pystep.c -o pystep.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c residcsum.c -o residcsum.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survConcordance.c -o survConcordance.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survdiff2.c -o survdiff2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survfit4.c -o survfit4.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survfitaj.c -o survfitaj.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survfitkm.c -o survfitkm.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survfitresid.c -o survfitresid.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survpenal.c -o survpenal.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survreg6.c -o survreg6.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survreg7.c -o survreg7.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survregc1.c -o survregc1.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survregc2.c -o survregc2.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c survsplit.c -o survsplit.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c tmerge.c -o tmerge.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c twoclust.c -o twoclust.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c zph1.c -o zph1.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c zph2.c -o zph2.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart3.o agscore2.o agscore3.o agsurv4.o agsurv5.o cdecomp.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o collapse.o concordance1.o concordance3.o concordance5.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore2.o coxsurv1.o coxsurv2.o coxsurv3.o coxsurv4.o dmatrix.o doloop.o fastkm.o finegray.o gchol.o init.o multicheck.o norisk.o pyears1.o pyears2.o pyears3b.o pystep.o residcsum.o survConcordance.o survdiff2.o survfit4.o survfitaj.o survfitkm.o survfitresid.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o twoclust.o zph1.o zph2.o -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (survival) begin installing recommended package boot * installing *source* package 'boot' ... ** package 'boot' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (boot) * installing *source* package 'mgcv' ... ** package 'mgcv' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'Apple clang version 14.0.0 (clang-1400.0.29.202)' using SDK: 'MacOSX13.1.sdk' gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c coxph.c -o coxph.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c davies.c -o davies.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c discrete.c -o discrete.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c gdi.c -o gdi.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c magic.c -o magic.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c mat.c -o mat.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c matrix.c -o matrix.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c mgcv.c -o mgcv.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c misc.c -o misc.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c mvn.c -o mvn.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c ncv.c -o ncv.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c qp.c -o qp.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c soap.c -o soap.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c sparse-smooth.c -o sparse-smooth.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c sparse.c -o sparse.o gcc -I"/Users/pd/r-devel/BUILD-dist/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c tprs.c -o tprs.o gcc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/usr/local/lib -o mgcv.so coxph.o davies.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o ncv.o qp.o soap.o sparse-smooth.o sparse.o tprs.o -L/Users/pd/r-devel/BUILD-dist/lib -lRlapack -L/Users/pd/r-devel/BUILD-dist/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -Wl,-framework -Wl,CoreFoundation ld: warning: -undefined dynamic_lookup may not work with chained fixups installing to /Users/pd/r-devel/BUILD-dist/library/mgcv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (mgcv) + cd ../R + svn commit -m 'maintainer-mode changes' + make dist SVN-REVISION is unchanged make[1]: Nothing to be done for `front-matter'. make[1]: Nothing to be done for `html-non-svn'. make[1]: Nothing to be done for `R'. make[1]: Nothing to be done for `R'. make[2]: Nothing to be done for `R'. make[3]: Nothing to be done for `R'. make[4]: `libRblas.dylib' is up to date. /Users/pd/r-devel/BUILD-dist/lib/libRblas.dylib is unchanged make[4]: `libxdr.a' is up to date. ../../../src/include/libintl.h is unchanged ../../../include/libintl.h is unchanged make[4]: `charsetalias.h' is up to date. make[4]: `Makedeps' is up to date. make[4]: `libintl.a' is up to date. make[4]: `Makedeps' is up to date. make[4]: `libtre.a' is up to date. make[4]: `Makedeps' is up to date. make[4]: `libtz.a' is up to date. make[3]: `libappl.a' is up to date. make[3]: `libnmath.a' is up to date. make[3]: `libunix.a' is up to date. gcc -I. -I../../src/include -I../../../R/src/include -I/usr/X11/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -L/usr/local/lib -DR_HOME='"/Users/pd/r-devel/BUILD-dist"' \ -o Rscript ../../../R/src/unix/Rscript.c /Users/pd/r-devel/BUILD-dist/bin/exec/R is unchanged make[4]: `internet.so' is up to date. make[4]: `libRlapack.dylib' is up to date. /Users/pd/r-devel/BUILD-dist/lib/libRlapack.dylib is unchanged make[4]: `lapack.so' is up to date. make[4]: `R_X11.so' is up to date. make[4]: `R_de.so' is up to date. /Users/pd/r-devel/BUILD-dist/modules/R_X11.so is unchanged /Users/pd/r-devel/BUILD-dist/modules/R_de.so is unchanged building system startup profile building package 'translations' building package 'base' all.R is unchanged building package 'tools' all.R is unchanged make[4]: `../../../library/tools/wre.txt' is up to date. ../../../../library/tools/libs/tools.so is unchanged installing 'sysdata.rda' building package 'compiler' all.R is unchanged make[4]: Nothing to be done for `mklazycomp'. make[3]: Nothing to be done for `mklazycomp'. make[3]: Nothing to be done for `mklazycomp'. building package 'utils' all.R is unchanged make[4]: Nothing to be done for `iconvlist'. ../../../../library/utils/libs/utils.so is unchanged installing 'sysdata.rda' make[4]: Nothing to be done for `mklazycomp'. building package 'grDevices' all.R is unchanged ../../../../library/grDevices/libs/grDevices.so is unchanged make[9]: `cairo.so' is up to date. make[4]: Nothing to be done for `mklazycomp'. building package 'graphics' all.R is unchanged ../../../../library/graphics/libs/graphics.so is unchanged make[4]: Nothing to be done for `mklazycomp'. building package 'stats' all.R is unchanged ../../../../library/stats/libs/stats.so is unchanged make[4]: Nothing to be done for `mklazycomp'. building package 'datasets' building package 'methods' all.R is unchanged ../../../../library/methods/libs/methods.so is unchanged make[4]: Nothing to be done for `RfilesLazy'. building package 'grid' all.R is unchanged ../../../../library/grid/libs/grid.so is unchanged make[4]: Nothing to be done for `mklazycomp'. building package 'splines' all.R is unchanged ../../../../library/splines/libs/splines.so is unchanged make[4]: Nothing to be done for `mklazycomp'. building package 'stats4' all.R is unchanged make[4]: Nothing to be done for `mklazycomp'. building package 'tcltk' all.R is unchanged ../../../../library/tcltk/libs/tcltk.so is unchanged make[4]: Nothing to be done for `mklazycomp'. building package 'parallel' all.R is unchanged ../../../../library/parallel/libs/parallel.so is unchanged make[4]: Nothing to be done for `mklazycomp'. installing parsed NAMESPACE files make[1]: Nothing to be done for `R'. building/updating vignettes for package 'grid' ... building/updating vignettes for package 'parallel' ... building/updating vignettes for package 'utils' ... building/updating vignettes for package 'stats' ... config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile chmod -R a+r R-4.5.0 chmod -R go-w R-4.5.0 distname=`../R/tools/GETDISTNAME`; \ dirname=`echo ${distname} | sed -e s/_.*//`; \ if test R-4.5.0 != ${dirname} ; then \ mv R-4.5.0 ${dirname}; \ fi ; \ rm -f ${distname}.tar.gz; \ /usr/bin/tar cf ${distname}.tar ${dirname} && /usr/bin/gzip --best ${distname}.tar; \ rm -Rf ${dirname} ++ echo R-devel_2024-12-01_r87412.tar.gz + RNOW=R-devel_2024-12-01_r87412.tar.gz + cp R-devel_2024-12-01_r87412.tar.gz /Users/pd/R-pre ++ basename -s .gz R-devel_2024-12-01_r87412.tar.gz + RNOWBASE=R-devel_2024-12-01_r87412.tar + RNOWXZ=R-devel_2024-12-01_r87412.tar.xz + gunzip -c R-devel_2024-12-01_r87412.tar.gz + xz -9e + cp R-devel_2024-12-01_r87412.tar.xz /Users/pd/R-pre + ln -sf R-devel_2024-12-01_r87412.tar.gz /Users/pd/R-pre/R-devel.tar.gz + ln -sf R-devel_2024-12-01_r87412.tar.xz /Users/pd/R-pre/R-devel.tar.xz + find /Users/pd/R-pre -name 'R-devel_*.gz' -mmin +10000 -exec rm '{}' ';' + find /Users/pd/R-pre -name 'R-devel_*.xz' -mmin +10000 -exec rm '{}' ';' + rsync -aOvuz --no-p /Users/pd/R-pre/ cran.r-project.org:/srv/ftp/pub/R/src/base-prerelease building file list ... done R-devel.tar.gz -> R-devel_2024-12-01_r87412.tar.gz R-devel.tar.xz -> R-devel_2024-12-01_r87412.tar.xz R-devel_2024-12-01_r87412.tar.gz R-devel_2024-12-01_r87412.tar.xz